progressivemauve (1.2.0+4713+dfsg-6)

Details

Core information at a glance

Distribution
ubuntu
Origin
ubuntu-stonking
Repository
https://nl.archive.ubuntu.com/ubuntu
Codename
stonking
Component
universe
Source
none
Architecture
amd64
Section
universe/science
Priority
optional
Maintainer
Ubuntu Developers <[email protected]>

Size & integrity

Byte sizes and integrity verification

Installed size
4.6 kB
Size expected
981 kB
Size actual
981 kB
Size match

Dependencies

Required package dependencies

  • libboost-filesystem1.90.0 (>= 1.90.0)
  • libboost-iostreams1.90.0 (>= 1.90.0)
  • libboost-program-options1.90.0 (>= 1.90.0)
  • libc6 (>= 2.38)
  • libgcc-s1 (>= 3.4)
  • libgenome0 (>= 1.3.11+svn20110227.4616)
  • libmems1t64 (>= 1.6.0+4725)
  • libstdc++6 (>= 13.1)

Suggested packages

Recommended additional packages

  • None

Description

multiple genome alignment algorithms

Homepage Download .deb

Tags

Package classification tags

None

Checksums

Hash values and integrity verification status

TypeActualMatch
MD5a1045b54…567d4fc7
SHA-1de03b5ec…5b782ecc
SHA-2561e0cf110…e98cb4a5
SHA-512bbe33bf6…7bb21b8b

Contents

Files and directories included

.
usr
usr/bin
usr/bin/addUnalignedIntervals
usr/bin/alignmentProjector
usr/bin/backbone_global_to_local
usr/bin/bbAnalyze
usr/bin/bbFilter
usr/bin/coordinateTranslate
usr/bin/createBackboneMFA
usr/bin/extractBCITrees
usr/bin/getAlignmentWindows
usr/bin/getOrthologList
usr/bin/makeBadgerMatrix
usr/bin/mauveAligner
usr/bin/mauveToXMFA
usr/bin/mfa2xmfa
usr/bin/progressiveMauve
usr/bin/projectAndStrip
usr/bin/randomGeneSample
usr/bin/repeatoire
usr/bin/scoreAlignment
usr/bin/stripGapColumns
usr/bin/stripSubsetLCBs
usr/bin/toGrimmFormat
usr/bin/toMultiFastA
usr/bin/toRawSequence
usr/bin/uniqueMerCount
usr/bin/uniquifyTrees
usr/bin/xmfa2maf
usr/share
usr/share/doc
usr/share/doc/progressivemauve
usr/share/doc/progressivemauve/README.test
usr/share/doc/progressivemauve/changelog.Debian.gz
usr/share/doc/progressivemauve/copyright
usr/share/doc/progressivemauve/run-unit-test
usr/share/doc/progressivemauve/test_data
usr/share/doc/progressivemauve/test_data/all_virii.fasta.gz
usr/share/doc/progressivemauve/test_data/genome_1.gbk.gz
usr/share/doc/progressivemauve/test_data/genome_2.gbk.gz
usr/share/doc/progressivemauve/test_data/genome_3.gbk.gz
usr/share/man
usr/share/man/man1
usr/share/man/man1/addUnalignedIntervals.1.gz
usr/share/man/man1/bbFilter.1.gz
usr/share/man/man1/coordinateTranslate.1.gz
usr/share/man/man1/extractBCITrees.1.gz
usr/share/man/man1/mauveAligner.1.gz
usr/share/man/man1/progressiveMauve.1.gz
usr/share/man/man1/repeatoire.1.gz
usr/share/man/man1/alignmentProjector.1.gz
usr/share/man/man1/backbone_global_to_local.1.gz
usr/share/man/man1/bbAnalyze.1.gz
usr/share/man/man1/createBackboneMFA.1.gz
usr/share/man/man1/getAlignmentWindows.1.gz
usr/share/man/man1/getOrthologList.1.gz
usr/share/man/man1/makeBadgerMatrix.1.gz
usr/share/man/man1/mauveToXMFA.1.gz
usr/share/man/man1/mfa2xmfa.1.gz
usr/share/man/man1/projectAndStrip.1.gz
usr/share/man/man1/randomGeneSample.1.gz
usr/share/man/man1/scoreAlignment.1.gz
usr/share/man/man1/stripGapColumns.1.gz
usr/share/man/man1/stripSubsetLCBs.1.gz
usr/share/man/man1/toGrimmFormat.1.gz
usr/share/man/man1/toMultiFastA.1.gz
usr/share/man/man1/toRawSequence.1.gz
usr/share/man/man1/uniqueMerCount.1.gz
usr/share/man/man1/uniquifyTrees.1.gz
usr/share/man/man1/xmfa2maf.1.gz