python3-cobra (0.29.1-4ubuntu1)

Details

Core information at a glance

Distribution
ubuntu
Origin
ubuntu-stonking
Repository
https://nl.archive.ubuntu.com/ubuntu
Codename
stonking
Component
universe
Source
python-cobra
Architecture
amd64
Section
universe/python
Priority
optional
Maintainer
Ubuntu Developers <[email protected]>

Size & integrity

Byte sizes and integrity verification

Installed size
1.9 kB
Size expected
1.1 MB
Size actual
1.1 MB
Size match

Dependencies

Required package dependencies

  • python-cobra-data (= 0.29.1-4ubuntu1)
  • python3-numpy
  • python3-pandas
  • python3-ruamel.yaml
  • python3-sbml5
  • python3-swiglpk (>= 5.0.8-1~)
  • python3-tabulate
  • python3-depinfo
  • python3-diskcache
  • python3-httpx
  • python3-optlang (>= 1.7.0-1~)
  • python3-platformdirs
  • python3-pydantic
  • python3-rich
  • python3:any

Suggested packages

Recommended additional packages

  • python3-matplotlib
  • qsopt-ex

Description

constraint-based modeling of biological networks with Python 3

Homepage Download .deb

Tags

Package classification tags

None

Checksums

Hash values and integrity verification status

TypeActualMatch
MD552d671ae…9df74f0f
SHA-1a4190d90…e6d6b013
SHA-2568d3e293a…4bed51cd
SHA-5125a082320…72aa6c60

Contents

Files and directories included

.
usr
usr/lib
usr/lib/python3
usr/lib/python3/dist-packages
usr/lib/python3/dist-packages/cobra
usr/lib/python3/dist-packages/cobra/__init__.py
usr/lib/python3/dist-packages/cobra/core
usr/lib/python3/dist-packages/cobra/core/__init__.py
usr/lib/python3/dist-packages/cobra/core/configuration.py
usr/lib/python3/dist-packages/cobra/core/dictlist.py
usr/lib/python3/dist-packages/cobra/core/formula.py
usr/lib/python3/dist-packages/cobra/core/gene.py
usr/lib/python3/dist-packages/cobra/core/group.py
usr/lib/python3/dist-packages/cobra/core/metabolite.py
usr/lib/python3/dist-packages/cobra/core/model.py
usr/lib/python3/dist-packages/cobra/core/object.py
usr/lib/python3/dist-packages/cobra/core/reaction.py
usr/lib/python3/dist-packages/cobra/core/singleton.py
usr/lib/python3/dist-packages/cobra/core/solution.py
usr/lib/python3/dist-packages/cobra/core/species.py
usr/lib/python3/dist-packages/cobra/data
usr/lib/python3/dist-packages/cobra/data/__init__.py
usr/lib/python3/dist-packages/cobra/data/iJO1366.xml.gz
usr/lib/python3/dist-packages/cobra/data/mini.json
usr/lib/python3/dist-packages/cobra/data/mini.mat
usr/lib/python3/dist-packages/cobra/data/mini.yml
usr/lib/python3/dist-packages/cobra/data/mini_cobra.xml
usr/lib/python3/dist-packages/cobra/data/salmonella.xml.gz
usr/lib/python3/dist-packages/cobra/data/textbook.xml.gz
usr/lib/python3/dist-packages/cobra/exceptions.py
usr/lib/python3/dist-packages/cobra/flux_analysis
usr/lib/python3/dist-packages/cobra/flux_analysis/__init__.py
usr/lib/python3/dist-packages/cobra/flux_analysis/deletion.py
usr/lib/python3/dist-packages/cobra/flux_analysis/fastcc.py
usr/lib/python3/dist-packages/cobra/flux_analysis/gapfilling.py
usr/lib/python3/dist-packages/cobra/flux_analysis/geometric.py
usr/lib/python3/dist-packages/cobra/flux_analysis/helpers.py
usr/lib/python3/dist-packages/cobra/flux_analysis/loopless.py
usr/lib/python3/dist-packages/cobra/flux_analysis/moma.py
usr/lib/python3/dist-packages/cobra/flux_analysis/parsimonious.py
usr/lib/python3/dist-packages/cobra/flux_analysis/phenotype_phase_plane.py
usr/lib/python3/dist-packages/cobra/flux_analysis/reaction.py
usr/lib/python3/dist-packages/cobra/flux_analysis/room.py
usr/lib/python3/dist-packages/cobra/flux_analysis/variability.py
usr/lib/python3/dist-packages/cobra/io
usr/lib/python3/dist-packages/cobra/io/__init__.py
usr/lib/python3/dist-packages/cobra/io/dict.py
usr/lib/python3/dist-packages/cobra/io/json.py
usr/lib/python3/dist-packages/cobra/io/mat.py
usr/lib/python3/dist-packages/cobra/io/sbml.py
usr/lib/python3/dist-packages/cobra/io/schema_v1.json
usr/lib/python3/dist-packages/cobra/io/web
usr/lib/python3/dist-packages/cobra/io/web/__init__.py
usr/lib/python3/dist-packages/cobra/io/web/abstract_model_repository.py
usr/lib/python3/dist-packages/cobra/io/web/bigg_models_repository.py
usr/lib/python3/dist-packages/cobra/io/web/biomodels_repository.py
usr/lib/python3/dist-packages/cobra/io/web/cobrapy_repository.py
usr/lib/python3/dist-packages/cobra/io/web/load.py
usr/lib/python3/dist-packages/cobra/io/yaml.py
usr/lib/python3/dist-packages/cobra/manipulation
usr/lib/python3/dist-packages/cobra/manipulation/__init__.py
usr/lib/python3/dist-packages/cobra/manipulation/annotate.py
usr/lib/python3/dist-packages/cobra/manipulation/delete.py
usr/lib/python3/dist-packages/cobra/manipulation/modify.py
usr/lib/python3/dist-packages/cobra/manipulation/validate.py
usr/lib/python3/dist-packages/cobra/medium
usr/lib/python3/dist-packages/cobra/medium/__init__.py
usr/lib/python3/dist-packages/cobra/medium/annotations.py
usr/lib/python3/dist-packages/cobra/medium/boundary_types.py
usr/lib/python3/dist-packages/cobra/medium/minimal_medium.py
usr/lib/python3/dist-packages/cobra/sampling
usr/lib/python3/dist-packages/cobra/sampling/__init__.py
usr/lib/python3/dist-packages/cobra/sampling/achr.py
usr/lib/python3/dist-packages/cobra/sampling/core.py
usr/lib/python3/dist-packages/cobra/sampling/hr_sampler.py
usr/lib/python3/dist-packages/cobra/sampling/optgp.py
usr/lib/python3/dist-packages/cobra/sampling/sampling.py
usr/lib/python3/dist-packages/cobra/summary
usr/lib/python3/dist-packages/cobra/summary/__init__.py
usr/lib/python3/dist-packages/cobra/summary/metabolite_summary.py
usr/lib/python3/dist-packages/cobra/summary/model_summary.py
usr/lib/python3/dist-packages/cobra/summary/reaction_summary.py
usr/lib/python3/dist-packages/cobra/summary/summary.py
usr/lib/python3/dist-packages/cobra/test
usr/lib/python3/dist-packages/cobra/util
usr/lib/python3/dist-packages/cobra/util/__init__.py
usr/lib/python3/dist-packages/cobra/util/array.py
usr/lib/python3/dist-packages/cobra/util/context.py
usr/lib/python3/dist-packages/cobra/util/process_pool.py
usr/lib/python3/dist-packages/cobra/util/solver.py
usr/lib/python3/dist-packages/cobra/util/util.py
usr/lib/python3/dist-packages/cobra-0.29.1.egg-info
usr/lib/python3/dist-packages/cobra-0.29.1.egg-info/PKG-INFO
usr/lib/python3/dist-packages/cobra-0.29.1.egg-info/dependency_links.txt
usr/lib/python3/dist-packages/cobra-0.29.1.egg-info/requires.txt
usr/lib/python3/dist-packages/cobra-0.29.1.egg-info/top_level.txt
usr/lib/python3/dist-packages/cobra-0.29.1.egg-info/zip-safe
usr/share
usr/share/doc
usr/share/doc/python3-cobra
usr/share/doc/python3-cobra/README.rst.gz
usr/share/doc/python3-cobra/changelog.Debian.gz
usr/share/doc/python3-cobra/copyright
usr/share/lintian
usr/share/lintian/overrides
usr/share/lintian/overrides/python3-cobra
usr/lib/python3/dist-packages/cobra/test/data