python3-prody (2.6.1+dfsg-4)

Details

Core information at a glance

Distribution
ubuntu
Origin
ubuntu-stonking
Repository
https://nl.archive.ubuntu.com/ubuntu
Codename
stonking
Component
universe
Source
prody
Architecture
amd64
Section
universe/science
Priority
optional
Maintainer
Ubuntu Developers <[email protected]>

Size & integrity

Byte sizes and integrity verification

Installed size
4.3 kB
Size expected
1.1 MB
Size actual
1.1 MB
Size match

Dependencies

Required package dependencies

  • python3 (<< 3.15)
  • python3 (>= 3.14~)
  • python3-biopython
  • python3-numpy
  • python3-numpy2-abi0 | python3-numpy-abi9
  • python3-pyparsing
  • python3-scipy
  • python3-setuptools
  • python3:any
  • libc6 (>= 2.35)
  • libgcc-s1 (>= 3.3.1)
  • libstdc++6 (>= 13.1)

Suggested packages

Recommended additional packages

  • None

Description

Python package for protein dynamics analysis

Tags

Package classification tags

None

Checksums

Hash values and integrity verification status

TypeActualMatch
MD5d4d38a4c…7e5376d5
SHA-17800cd6f…b4341983
SHA-256fc5e3e14…eeaf840e
SHA-5123730b112…1b9edbd9

Contents

Files and directories included

.
usr
usr/bin
usr/bin/evol
usr/bin/prody
usr/lib
usr/lib/python3
usr/lib/python3/dist-packages
usr/lib/python3/dist-packages/ProDy-2.6.1.egg-info
usr/lib/python3/dist-packages/ProDy-2.6.1.egg-info/PKG-INFO
usr/lib/python3/dist-packages/ProDy-2.6.1.egg-info/dependency_links.txt
usr/lib/python3/dist-packages/ProDy-2.6.1.egg-info/entry_points.txt
usr/lib/python3/dist-packages/ProDy-2.6.1.egg-info/requires.txt
usr/lib/python3/dist-packages/ProDy-2.6.1.egg-info/top_level.txt
usr/lib/python3/dist-packages/prody
usr/lib/python3/dist-packages/prody/__init__.py
usr/lib/python3/dist-packages/prody/apps
usr/lib/python3/dist-packages/prody/apps/__init__.py
usr/lib/python3/dist-packages/prody/apps/apptools.py
usr/lib/python3/dist-packages/prody/apps/evol_apps
usr/lib/python3/dist-packages/prody/apps/evol_apps/__init__.py
usr/lib/python3/dist-packages/prody/apps/evol_apps/evol_coevol.py
usr/lib/python3/dist-packages/prody/apps/evol_apps/evol_conserv.py
usr/lib/python3/dist-packages/prody/apps/evol_apps/evol_fetch.py
usr/lib/python3/dist-packages/prody/apps/evol_apps/evol_filter.py
usr/lib/python3/dist-packages/prody/apps/evol_apps/evol_merge.py
usr/lib/python3/dist-packages/prody/apps/evol_apps/evol_occupancy.py
usr/lib/python3/dist-packages/prody/apps/evol_apps/evol_rankorder.py
usr/lib/python3/dist-packages/prody/apps/evol_apps/evol_refine.py
usr/lib/python3/dist-packages/prody/apps/evol_apps/evol_search.py
usr/lib/python3/dist-packages/prody/apps/prody_apps
usr/lib/python3/dist-packages/prody/apps/prody_apps/__init__.py
usr/lib/python3/dist-packages/prody/apps/prody_apps/nmaoptions.py
usr/lib/python3/dist-packages/prody/apps/prody_apps/prody_align.py
usr/lib/python3/dist-packages/prody/apps/prody_apps/prody_anm.py
usr/lib/python3/dist-packages/prody/apps/prody_apps/prody_biomol.py
usr/lib/python3/dist-packages/prody/apps/prody_apps/prody_blast.py
usr/lib/python3/dist-packages/prody/apps/prody_apps/prody_catdcd.py
usr/lib/python3/dist-packages/prody/apps/prody_apps/prody_clustenm.py
usr/lib/python3/dist-packages/prody/apps/prody_apps/prody_contacts.py
usr/lib/python3/dist-packages/prody/apps/prody_apps/prody_eda.py
usr/lib/python3/dist-packages/prody/apps/prody_apps/prody_energy.py
usr/lib/python3/dist-packages/prody/apps/prody_apps/prody_fetch.py
usr/lib/python3/dist-packages/prody/apps/prody_apps/prody_gnm.py
usr/lib/python3/dist-packages/prody/apps/prody_apps/prody_pca.py
usr/lib/python3/dist-packages/prody/apps/prody_apps/prody_rtb.py
usr/lib/python3/dist-packages/prody/apps/prody_apps/prody_select.py
usr/lib/python3/dist-packages/prody/atomic
usr/lib/python3/dist-packages/prody/atomic/__init__.py
usr/lib/python3/dist-packages/prody/atomic/acceptor.py
usr/lib/python3/dist-packages/prody/atomic/angle.py
usr/lib/python3/dist-packages/prody/atomic/atom.py
usr/lib/python3/dist-packages/prody/atomic/atomgroup.py
usr/lib/python3/dist-packages/prody/atomic/atomic.py
usr/lib/python3/dist-packages/prody/atomic/atommap.py
usr/lib/python3/dist-packages/prody/atomic/bond.py
usr/lib/python3/dist-packages/prody/atomic/chain.py
usr/lib/python3/dist-packages/prody/atomic/crossterm.py
usr/lib/python3/dist-packages/prody/atomic/dihedral.py
usr/lib/python3/dist-packages/prody/atomic/donor.py
usr/lib/python3/dist-packages/prody/atomic/fields.py
usr/lib/python3/dist-packages/prody/atomic/flags.py
usr/lib/python3/dist-packages/prody/atomic/functions.py
usr/lib/python3/dist-packages/prody/atomic/hierview.py
usr/lib/python3/dist-packages/prody/atomic/improper.py
usr/lib/python3/dist-packages/prody/atomic/nbexclusion.py
usr/lib/python3/dist-packages/prody/atomic/pointer.py
usr/lib/python3/dist-packages/prody/atomic/residue.py
usr/lib/python3/dist-packages/prody/atomic/segment.py
usr/lib/python3/dist-packages/prody/atomic/select.py
usr/lib/python3/dist-packages/prody/atomic/selection.py
usr/lib/python3/dist-packages/prody/atomic/subset.py
usr/lib/python3/dist-packages/prody/chromatin
usr/lib/python3/dist-packages/prody/chromatin/__init__.py
usr/lib/python3/dist-packages/prody/chromatin/cluster.py
usr/lib/python3/dist-packages/prody/chromatin/functions.py
usr/lib/python3/dist-packages/prody/chromatin/hic.py
usr/lib/python3/dist-packages/prody/chromatin/norm.py
usr/lib/python3/dist-packages/prody/chromatin/straw.py
usr/lib/python3/dist-packages/prody/compounds
usr/lib/python3/dist-packages/prody/compounds/__init__.py
usr/lib/python3/dist-packages/prody/compounds/bird.py
usr/lib/python3/dist-packages/prody/compounds/ccd.py
usr/lib/python3/dist-packages/prody/compounds/functions.py
usr/lib/python3/dist-packages/prody/compounds/pdbligands.py
usr/lib/python3/dist-packages/prody/database
usr/lib/python3/dist-packages/prody/database/__init__.py
usr/lib/python3/dist-packages/prody/database/bioexcel.py
usr/lib/python3/dist-packages/prody/database/cath.py
usr/lib/python3/dist-packages/prody/database/dali.py
usr/lib/python3/dist-packages/prody/database/goa.py
usr/lib/python3/dist-packages/prody/database/interpro.py
usr/lib/python3/dist-packages/prody/database/pfam.py
usr/lib/python3/dist-packages/prody/database/quartataweb.py
usr/lib/python3/dist-packages/prody/database/uniprot.py
usr/lib/python3/dist-packages/prody/domain_decomposition
usr/lib/python3/dist-packages/prody/domain_decomposition/__init__.py
usr/lib/python3/dist-packages/prody/domain_decomposition/spectrus.py
usr/lib/python3/dist-packages/prody/dynamics
usr/lib/python3/dist-packages/prody/dynamics/__init__.py
usr/lib/python3/dist-packages/prody/dynamics/adaptive.py
usr/lib/python3/dist-packages/prody/dynamics/analysis.py
usr/lib/python3/dist-packages/prody/dynamics/anm.py
usr/lib/python3/dist-packages/prody/dynamics/anmd.py
usr/lib/python3/dist-packages/prody/dynamics/bbenm.py
usr/lib/python3/dist-packages/prody/dynamics/bildfile.py
usr/lib/python3/dist-packages/prody/dynamics/clustenm.py
usr/lib/python3/dist-packages/prody/dynamics/compare.py
usr/lib/python3/dist-packages/prody/dynamics/editing.py
usr/lib/python3/dist-packages/prody/dynamics/entropy.py
usr/lib/python3/dist-packages/prody/dynamics/essa.py
usr/lib/python3/dist-packages/prody/dynamics/exanm.py
usr/lib/python3/dist-packages/prody/dynamics/exgnm.py
usr/lib/python3/dist-packages/prody/dynamics/functions.py
usr/lib/python3/dist-packages/prody/dynamics/gamma.py
usr/lib/python3/dist-packages/prody/dynamics/gnm.py
usr/lib/python3/dist-packages/prody/dynamics/heatmapper.py
usr/lib/python3/dist-packages/prody/dynamics/imanm.py
usr/lib/python3/dist-packages/prody/dynamics/lda.py
usr/lib/python3/dist-packages/prody/dynamics/logistic.py
usr/lib/python3/dist-packages/prody/dynamics/mechstiff.py
usr/lib/python3/dist-packages/prody/dynamics/mode.py
usr/lib/python3/dist-packages/prody/dynamics/modeset.py
usr/lib/python3/dist-packages/prody/dynamics/nma.py
usr/lib/python3/dist-packages/prody/dynamics/nmdfile.py
usr/lib/python3/dist-packages/prody/dynamics/pca.py
usr/lib/python3/dist-packages/prody/dynamics/perturb.py
usr/lib/python3/dist-packages/prody/dynamics/plotting.py
usr/lib/python3/dist-packages/prody/dynamics/rtb.py
usr/lib/python3/dist-packages/prody/dynamics/rtbtools.cpython-314-x86_64-linux-gnu.so
usr/lib/python3/dist-packages/prody/dynamics/sampling.py
usr/lib/python3/dist-packages/prody/dynamics/signature.py
usr/lib/python3/dist-packages/prody/dynamics/smtools.cpython-314-x86_64-linux-gnu.so
usr/lib/python3/dist-packages/prody/dynamics/vmdfile.py
usr/lib/python3/dist-packages/prody/ensemble
usr/lib/python3/dist-packages/prody/ensemble/__init__.py
usr/lib/python3/dist-packages/prody/ensemble/conformation.py
usr/lib/python3/dist-packages/prody/ensemble/ensemble.py
usr/lib/python3/dist-packages/prody/ensemble/functions.py
usr/lib/python3/dist-packages/prody/ensemble/pdbensemble.py
usr/lib/python3/dist-packages/prody/kdtree
usr/lib/python3/dist-packages/prody/kdtree/_CKDTree.cpython-314-x86_64-linux-gnu.so
usr/lib/python3/dist-packages/prody/kdtree/__init__.py
usr/lib/python3/dist-packages/prody/kdtree/kdtree.py
usr/lib/python3/dist-packages/prody/measure
usr/lib/python3/dist-packages/prody/measure/__init__.py
usr/lib/python3/dist-packages/prody/measure/contacts.py
usr/lib/python3/dist-packages/prody/measure/measure.py
usr/lib/python3/dist-packages/prody/measure/transform.py
usr/lib/python3/dist-packages/prody/proteins
usr/lib/python3/dist-packages/prody/proteins/__init__.py
usr/lib/python3/dist-packages/prody/proteins/blastpdb.py
usr/lib/python3/dist-packages/prody/proteins/ccealign.cpython-314-x86_64-linux-gnu.so
usr/lib/python3/dist-packages/prody/proteins/ciffile.py
usr/lib/python3/dist-packages/prody/proteins/cifheader.py
usr/lib/python3/dist-packages/prody/proteins/compare.py
usr/lib/python3/dist-packages/prody/proteins/dssp.py
usr/lib/python3/dist-packages/prody/proteins/emdfile.py
usr/lib/python3/dist-packages/prody/proteins/fixer.py
usr/lib/python3/dist-packages/prody/proteins/functions.py
usr/lib/python3/dist-packages/prody/proteins/header.py
usr/lib/python3/dist-packages/prody/proteins/interactions.py
usr/lib/python3/dist-packages/prody/proteins/localpdb.py
usr/lib/python3/dist-packages/prody/proteins/mmtffile.py
usr/lib/python3/dist-packages/prody/proteins/opm.py
usr/lib/python3/dist-packages/prody/proteins/pdbclusters.py
usr/lib/python3/dist-packages/prody/proteins/pdbfile.py
usr/lib/python3/dist-packages/prody/proteins/starfile.py
usr/lib/python3/dist-packages/prody/proteins/stride.py
usr/lib/python3/dist-packages/prody/proteins/tabulated_energies.txt
usr/lib/python3/dist-packages/prody/proteins/waterbridges.py
usr/lib/python3/dist-packages/prody/proteins/wwpdb.py
usr/lib/python3/dist-packages/prody/sequence
usr/lib/python3/dist-packages/prody/sequence/__init__.py
usr/lib/python3/dist-packages/prody/sequence/analysis.py
usr/lib/python3/dist-packages/prody/sequence/msa.py
usr/lib/python3/dist-packages/prody/sequence/msafile.py
usr/lib/python3/dist-packages/prody/sequence/msaio.cpython-314-x86_64-linux-gnu.so
usr/lib/python3/dist-packages/prody/sequence/msatools.cpython-314-x86_64-linux-gnu.so
usr/lib/python3/dist-packages/prody/sequence/plotting.py
usr/lib/python3/dist-packages/prody/sequence/seqtools.cpython-314-x86_64-linux-gnu.so
usr/lib/python3/dist-packages/prody/sequence/sequence.py
usr/lib/python3/dist-packages/prody/trajectory
usr/lib/python3/dist-packages/prody/trajectory/__init__.py
usr/lib/python3/dist-packages/prody/trajectory/dcdfile.py
usr/lib/python3/dist-packages/prody/trajectory/frame.py
usr/lib/python3/dist-packages/prody/trajectory/psffile.py
usr/lib/python3/dist-packages/prody/trajectory/trajbase.py
usr/lib/python3/dist-packages/prody/trajectory/trajectory.py
usr/lib/python3/dist-packages/prody/trajectory/trajfile.py
usr/lib/python3/dist-packages/prody/utilities
usr/lib/python3/dist-packages/prody/utilities/TreeConstruction.py
usr/lib/python3/dist-packages/prody/utilities/__init__.py
usr/lib/python3/dist-packages/prody/utilities/catchall.py
usr/lib/python3/dist-packages/prody/utilities/checkers.py
usr/lib/python3/dist-packages/prody/utilities/datafiles
usr/lib/python3/dist-packages/prody/utilities/datafiles/mod_res_map.dat
usr/lib/python3/dist-packages/prody/utilities/datafiles/saxs_water.dat
usr/lib/python3/dist-packages/prody/utilities/doctools.py
usr/lib/python3/dist-packages/prody/utilities/drawtools.py
usr/lib/python3/dist-packages/prody/utilities/eigtools.py
usr/lib/python3/dist-packages/prody/utilities/laptools.py
usr/lib/python3/dist-packages/prody/utilities/legacy.py
usr/lib/python3/dist-packages/prody/utilities/logger.py
usr/lib/python3/dist-packages/prody/utilities/misctools.py
usr/lib/python3/dist-packages/prody/utilities/pathtools.py
usr/lib/python3/dist-packages/prody/utilities/seqtools.py
usr/lib/python3/dist-packages/prody/utilities/settings.py
usr/share
usr/share/doc
usr/share/doc/python3-prody
usr/share/doc/python3-prody/changelog.Debian.gz
usr/share/doc/python3-prody/copyright
usr/share/man
usr/share/man/man1
usr/share/man/man1/evol.1.gz
usr/share/man/man1/prody.1.gz