q2-dada2 (2024.5.0-1ubuntu3)
Details
Core information at a glance
- Distribution
- ubuntu
- Origin
- ubuntu-stonking
- Repository
- https://nl.archive.ubuntu.com/ubuntu
- Codename
- stonking
- Component
- universe
- Source
- none
- Architecture
- amd64
- Section
- universe/science
- Priority
- optional
- Maintainer
- Ubuntu Developers <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 2.3 kB
- Size expected
- 1.8 MB
- Size actual
- 1.8 MB
- Size match
Dependencies
Required package dependencies
Suggested packages
Recommended additional packages
- None
Description
QIIME 2 plugin to work with adapters in sequence data
Tags
Package classification tags
None
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | 33a52dcc…2c1aac72 | |
| SHA-1 | e7069791…320a6317 | |
| SHA-256 | 04691f79…3c26d750 | |
| SHA-512 | 53bcb93a…61feee49 |
Contents
Files and directories included
. usr usr/bin usr/bin/run_dada.R usr/lib usr/lib/python3 usr/lib/python3/dist-packages usr/lib/python3/dist-packages/q2_dada2 usr/lib/python3/dist-packages/q2_dada2/__init__.py usr/lib/python3/dist-packages/q2_dada2/_denoise.py usr/lib/python3/dist-packages/q2_dada2/_examples.py usr/lib/python3/dist-packages/q2_dada2/_stats.py usr/lib/python3/dist-packages/q2_dada2/_transformer.py usr/lib/python3/dist-packages/q2_dada2/_version.py usr/lib/python3/dist-packages/q2_dada2/citations.bib usr/lib/python3/dist-packages/q2_dada2/plugin_setup.py usr/lib/python3/dist-packages/q2_dada2/tests usr/lib/python3/dist-packages/q2_dada2/tests/__init__.py usr/lib/python3/dist-packages/q2_dada2/tests/data usr/lib/python3/dist-packages/q2_dada2/tests/data/expected usr/lib/python3/dist-packages/q2_dada2/tests/data/expected/ccs-default-stats.tsv usr/lib/python3/dist-packages/q2_dada2/tests/data/expected/ccs-default.fasta usr/lib/python3/dist-packages/q2_dada2/tests/data/expected/ccs-default.tsv usr/lib/python3/dist-packages/q2_dada2/tests/data/expected/paired-default-stats.tsv usr/lib/python3/dist-packages/q2_dada2/tests/data/expected/paired-default.fasta usr/lib/python3/dist-packages/q2_dada2/tests/data/expected/paired-default.tsv usr/lib/python3/dist-packages/q2_dada2/tests/data/expected/paired-override-stats.tsv usr/lib/python3/dist-packages/q2_dada2/tests/data/expected/paired-override.fasta usr/lib/python3/dist-packages/q2_dada2/tests/data/expected/paired-override.tsv usr/lib/python3/dist-packages/q2_dada2/tests/data/expected/paired-remove-empty-default.tsv usr/lib/python3/dist-packages/q2_dada2/tests/data/expected/pyro-default-stats.tsv usr/lib/python3/dist-packages/q2_dada2/tests/data/expected/pyro-default.fasta usr/lib/python3/dist-packages/q2_dada2/tests/data/expected/pyro-default.tsv usr/lib/python3/dist-packages/q2_dada2/tests/data/expected/single-default-stats.tsv usr/lib/python3/dist-packages/q2_dada2/tests/data/expected/single-default.fasta usr/lib/python3/dist-packages/q2_dada2/tests/data/expected/single-default.tsv usr/lib/python3/dist-packages/q2_dada2/tests/data/expected/single-override-stats.tsv usr/lib/python3/dist-packages/q2_dada2/tests/data/expected/single-override.fasta usr/lib/python3/dist-packages/q2_dada2/tests/data/expected/single-override.tsv usr/lib/python3/dist-packages/q2_dada2/tests/data/expected/single-pseudo-stats.tsv usr/lib/python3/dist-packages/q2_dada2/tests/data/expected/single-pseudo.fasta usr/lib/python3/dist-packages/q2_dada2/tests/data/expected/single-pseudo.tsv usr/lib/python3/dist-packages/q2_dada2/tests/data/expected/stats-format.tsv usr/lib/python3/dist-packages/q2_dada2/tests/data/expected/underscore-samples-stats.tsv usr/lib/python3/dist-packages/q2_dada2/tests/data/expected/underscore-samples.fasta usr/lib/python3/dist-packages/q2_dada2/tests/data/expected/underscore-samples.tsv usr/lib/python3/dist-packages/q2_dada2/tests/data/mixed_barcodes_and_ids usr/lib/python3/dist-packages/q2_dada2/tests/data/mixed_barcodes_and_ids/MANIFEST usr/lib/python3/dist-packages/q2_dada2/tests/data/mixed_barcodes_and_ids/V130_166_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/mixed_barcodes_and_ids/V130_2_167_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/mixed_barcodes_and_ids/V130_2_743_L001_R2_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/mixed_barcodes_and_ids/V130_742_L001_R2_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/mixed_barcodes_and_ids/metadata.yml usr/lib/python3/dist-packages/q2_dada2/tests/data/no_asvs.tsv usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_ccs usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_ccs/MANIFEST usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_ccs/R11_1_P2C2_8_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_ccs/R3_1_P2C2_2_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_ccs/R3_2_P2C2_3_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_ccs/R3_3_P2C2_0_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_ccs/R9_1B_P2C2_6_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_ccs/R9_1_P2C2_1_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_ccs/R9_2_P2C2_7_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_ccs/R9_3_P2C2_4_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_ccs/R9_4_P2C2_5_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_paired usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_paired/BAQ2420.2_10_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_paired/BAQ2420.2_11_L001_R2_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_paired/BAQ3473.2_0_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_paired/BAQ3473.2_1_L001_R2_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_paired/BAQ3473.3_2_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_paired/BAQ3473.3_3_L001_R2_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_paired/BAQ4166.2_4_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_paired/BAQ4166.2_5_L001_R2_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_paired/BAQ4166.3_14_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_paired/BAQ4166.3_15_L001_R2_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_paired/BLANK_20_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_paired/BLANK_21_L001_R2_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_paired/MANIFEST usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_paired/PAP130.2_6_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_paired/PAP130.2_7_L001_R2_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_paired/YUN1005.3_16_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_paired/YUN1005.3_17_L001_R2_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_paired/YUN1242.1_8_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_paired/YUN1242.1_9_L001_R2_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_paired/YUN1242.3_12_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_paired/YUN1242.3_13_L001_R2_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_paired/YUN3153.3_18_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_paired/YUN3153.3_19_L001_R2_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_paired/metadata.yml usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_single usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_single/L1S208_10_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_single/L1S257_11_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_single/L1S57_13_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_single/L1S76_12_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_single/L2S155_25_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_single/L2S175_27_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_single/L2S309_33_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_single/L2S357_15_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_single/L3S294_16_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_single/L3S313_32_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_single/L4S112_26_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_single/L4S63_31_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_single/L5S155_2_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_single/L5S174_29_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_single/L6S20_20_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_single/L6S68_30_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_single/MANIFEST usr/lib/python3/dist-packages/q2_dada2/tests/data/sample_seqs_single/metadata.yml usr/lib/python3/dist-packages/q2_dada2/tests/data/single_feature.tsv usr/lib/python3/dist-packages/q2_dada2/tests/data/underscore_samples usr/lib/python3/dist-packages/q2_dada2/tests/data/underscore_samples/L1_S208_10_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/underscore_samples/L1_S257_11_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/underscore_samples/L1_S57_13_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/underscore_samples/L1_S76_12_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/underscore_samples/L2_S155_25_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/underscore_samples/L2_S175_27_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/underscore_samples/L2_S309_33_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/underscore_samples/L2_S357_15_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/underscore_samples/L3_S294_16_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/underscore_samples/L3_S313_32_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/underscore_samples/L4_S112_26_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/underscore_samples/L4_S63_31_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/underscore_samples/L5_S155_2_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/underscore_samples/L5_S174_29_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/underscore_samples/L6_S20_20_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/underscore_samples/L6_S68_30_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_dada2/tests/data/underscore_samples/MANIFEST usr/lib/python3/dist-packages/q2_dada2/tests/data/underscore_samples/metadata.yml usr/lib/python3/dist-packages/q2_dada2/tests/test_denoise.py usr/lib/python3/dist-packages/q2_dada2/tests/test_stats.py usr/lib/python3/dist-packages/q2_dada2-2024.5.0.egg-info usr/lib/python3/dist-packages/q2_dada2-2024.5.0.egg-info/PKG-INFO usr/lib/python3/dist-packages/q2_dada2-2024.5.0.egg-info/dependency_links.txt usr/lib/python3/dist-packages/q2_dada2-2024.5.0.egg-info/entry_points.txt usr/lib/python3/dist-packages/q2_dada2-2024.5.0.egg-info/not-zip-safe usr/lib/python3/dist-packages/q2_dada2-2024.5.0.egg-info/top_level.txt usr/share usr/share/doc usr/share/doc/q2-dada2 usr/share/doc/q2-dada2/changelog.Debian.gz usr/share/doc/q2-dada2/copyright