r-bioc-tfbstools (1.44.0+dfsg-3)
Details
Core information at a glance
- Distribution
- ubuntu
- Origin
- ubuntu-stonking
- Repository
- https://nl.archive.ubuntu.com/ubuntu
- Codename
- stonking
- Component
- universe
- Source
- none
- Architecture
- amd64
- Section
- universe/gnu-r
- Priority
- optional
- Maintainer
- Ubuntu Developers <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 1.9 kB
- Size expected
- 1 MB
- Size actual
- 1 MB
- Size match
Dependencies
Required package dependencies
- r-api-4.0
- r-api-bioc-3.20
- r-bioc-biobase (>= 2.28)
- r-bioc-biostrings (>= 2.36.4)
- r-bioc-pwalign
- r-bioc-biocgenerics (>= 0.14.0)
- r-bioc-biocparallel (>= 1.2.21)
- r-bioc-bsgenome (>= 1.36.3)
- r-cran-catools (>= 1.17.1)
- r-bioc-cner (>= 1.4.0)
- r-bioc-dirichletmultinomial (>= 1.10.0)
- r-bioc-genomeinfodb (>= 1.6.1)
- r-bioc-genomicranges (>= 1.20.6)
- r-cran-gtools (>= 3.5.0)
- r-bioc-iranges (>= 2.2.7)
- r-cran-dbi (>= 0.6)
- r-cran-rsqlite (>= 1.0.0)
- r-bioc-rtracklayer (>= 1.28.10)
- r-bioc-seqlogo (>= 1.34.0)
- r-bioc-s4vectors (>= 0.9.25)
- r-cran-tfmpvalue (>= 0.0.5)
- r-cran-xml (>= 3.98-1.3)
- r-bioc-xvector (>= 0.8.0)
- libc6 (>= 2.4)
Suggested packages
Recommended additional packages
Description
GNU R Transcription Factor Binding Site (TFBS) Analysis
Tags
Package classification tags
None
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | b8054dbc…61013dc0 | |
| SHA-1 | 1ecea1a1…d928348f | |
| SHA-256 | 5e4a439d…22f02445 | |
| SHA-512 | f4679517…143dfd42 |
Contents
Files and directories included
. usr usr/lib usr/lib/R usr/lib/R/site-library usr/lib/R/site-library/TFBSTools usr/lib/R/site-library/TFBSTools/CITATION usr/lib/R/site-library/TFBSTools/DESCRIPTION usr/lib/R/site-library/TFBSTools/INDEX usr/lib/R/site-library/TFBSTools/Meta usr/lib/R/site-library/TFBSTools/Meta/Rd.rds usr/lib/R/site-library/TFBSTools/Meta/data.rds usr/lib/R/site-library/TFBSTools/Meta/features.rds usr/lib/R/site-library/TFBSTools/Meta/hsearch.rds usr/lib/R/site-library/TFBSTools/Meta/links.rds usr/lib/R/site-library/TFBSTools/Meta/nsInfo.rds usr/lib/R/site-library/TFBSTools/Meta/package.rds usr/lib/R/site-library/TFBSTools/Meta/vignette.rds usr/lib/R/site-library/TFBSTools/NAMESPACE usr/lib/R/site-library/TFBSTools/NEWS usr/lib/R/site-library/TFBSTools/R usr/lib/R/site-library/TFBSTools/R/TFBSTools usr/lib/R/site-library/TFBSTools/R/TFBSTools.rdb usr/lib/R/site-library/TFBSTools/R/TFBSTools.rdx usr/lib/R/site-library/TFBSTools/TFBSToolsBuild usr/lib/R/site-library/TFBSTools/TFBSToolsBuild/build.r usr/lib/R/site-library/TFBSTools/TFBSToolsBuild/build2.R usr/lib/R/site-library/TFBSTools/TFBSToolsBuild/timing.R usr/lib/R/site-library/TFBSTools/data usr/lib/R/site-library/TFBSTools/data/Rdata.rdb usr/lib/R/site-library/TFBSTools/data/Rdata.rds usr/lib/R/site-library/TFBSTools/data/Rdata.rdx usr/lib/R/site-library/TFBSTools/doc usr/lib/R/site-library/TFBSTools/doc/TFBSTools.R usr/lib/R/site-library/TFBSTools/doc/TFBSTools.Rmd usr/lib/R/site-library/TFBSTools/doc/index.html usr/lib/R/site-library/TFBSTools/extdata usr/lib/R/site-library/TFBSTools/extdata/MA0001.1.pfm usr/lib/R/site-library/TFBSTools/extdata/crp0.s usr/lib/R/site-library/TFBSTools/extdata/hg19.danRer7.net.axt usr/lib/R/site-library/TFBSTools/extdata/meme.output usr/lib/R/site-library/TFBSTools/extdata/pfm_all_example.txt usr/lib/R/site-library/TFBSTools/extdata/tffm_detailed.xml usr/lib/R/site-library/TFBSTools/extdata/tffm_first_order.xml usr/lib/R/site-library/TFBSTools/help usr/lib/R/site-library/TFBSTools/help/AnIndex usr/lib/R/site-library/TFBSTools/help/TFBSTools.rdb usr/lib/R/site-library/TFBSTools/help/TFBSTools.rdx usr/lib/R/site-library/TFBSTools/help/aliases.rds usr/lib/R/site-library/TFBSTools/help/paths.rds usr/lib/R/site-library/TFBSTools/html usr/lib/R/site-library/TFBSTools/html/00Index.html usr/lib/R/site-library/TFBSTools/html/R.css usr/lib/R/site-library/TFBSTools/libs usr/lib/R/site-library/TFBSTools/libs/TFBSTools.so usr/lib/R/site-library/TFBSTools/obsolete usr/lib/R/site-library/TFBSTools/obsolete/PairwiseAlignmentTFBS-class.Rd usr/lib/R/site-library/TFBSTools/obsolete/TFBSTools.Rnw usr/lib/R/site-library/TFBSTools/obsolete/matrixAligner.c usr/share usr/share/doc usr/share/doc/r-bioc-tfbstools usr/share/doc/r-bioc-tfbstools/changelog.Debian.gz usr/share/doc/r-bioc-tfbstools/copyright