ampliconnoise (1.29-17)

Details

Core information at a glance

Distribution
ubuntu
Origin
ubuntu-stonking
Repository
https://nl.archive.ubuntu.com/ubuntu
Codename
stonking
Component
universe
Source
none
Architecture
amd64v3
Section
universe/science
Priority
optional
Maintainer
Ubuntu Developers <[email protected]>

Size & integrity

Byte sizes and integrity verification

Installed size
2 kB
Size expected
1.1 MB
Size actual
1.1 MB
Size match

Dependencies

Required package dependencies

  • libc6 (>= 2.38)
  • libgsl28 (>= 2.8+dfsg)
  • libopenmpi40 (>= 5.0.8)
  • mafft

Suggested packages

Recommended additional packages

  • None

Description

removal of noise from 454 sequenced PCR amplicons

Homepage Download .deb

Tags

Package classification tags

None

Checksums

Hash values and integrity verification status

TypeActualMatch
MD54152a7e7…75e82eea
SHA-1ced61a23…7926ae26
SHA-25666e514b8…ceb8cea1
SHA-512554f5881…8bbd0d7b

Contents

Files and directories included

.
usr
usr/bin
usr/bin/FCluster
usr/bin/FastaUnique
usr/bin/NDist
usr/bin/Perseus
usr/bin/PerseusD
usr/bin/PyroDist
usr/bin/PyroNoise
usr/bin/PyroNoiseA
usr/bin/PyroNoiseM
usr/bin/SeqDist
usr/bin/SeqNoise
usr/bin/SplitClusterClust
usr/bin/SplitClusterEven
usr/share
usr/share/ampliconnoise
usr/share/ampliconnoise/Data
usr/share/ampliconnoise/Data/LookUp.dat
usr/share/ampliconnoise/Data/LookUp_E123.dat
usr/share/ampliconnoise/Data/LookUp_Titanium.dat
usr/share/ampliconnoise/Data/Tran.dat
usr/share/ampliconnoise/Data/TranN.dat
usr/share/ampliconnoise/Data/Tran_D.dat
usr/share/ampliconnoise/Data/Tran_V6.dat
usr/share/ampliconnoise/Scripts
usr/share/ampliconnoise/Scripts/CSV.pl
usr/share/ampliconnoise/Scripts/Class.pl
usr/share/ampliconnoise/Scripts/Clean.sh
usr/share/ampliconnoise/Scripts/Clean360.pl
usr/share/ampliconnoise/Scripts/CleanAcyclic.pl
usr/share/ampliconnoise/Scripts/CleanBoth.pl
usr/share/ampliconnoise/Scripts/CleanBothM.pl
usr/share/ampliconnoise/Scripts/CleanMinMax.pl
usr/share/ampliconnoise/Scripts/CleanMinMax.sh
usr/share/ampliconnoise/Scripts/ConvertDatFasta.pl
usr/share/ampliconnoise/Scripts/CountFasta.pl
usr/share/ampliconnoise/Scripts/CountSequences.pl
usr/share/ampliconnoise/Scripts/Diversity.pl
usr/share/ampliconnoise/Scripts/FilterGoodClass.pl
usr/share/ampliconnoise/Scripts/FlowsFA.pl
usr/share/ampliconnoise/Scripts/FlowsFA360.pl
usr/share/ampliconnoise/Scripts/FlowsMinMax.pl
usr/share/ampliconnoise/Scripts/Join.pl
usr/share/ampliconnoise/Scripts/Map.pl
usr/share/ampliconnoise/Scripts/MedianS.sh
usr/share/ampliconnoise/Scripts/Parse.pl
usr/share/ampliconnoise/Scripts/ParseBoth.pl
usr/share/ampliconnoise/Scripts/Qiime.pl
usr/share/ampliconnoise/Scripts/Qiime_OTU.pl
usr/share/ampliconnoise/Scripts/Qiime_Typical.pl
usr/share/ampliconnoise/Scripts/RunBoth.sh
usr/share/ampliconnoise/Scripts/RunBothFLX.sh
usr/share/ampliconnoise/Scripts/RunFLX.sh
usr/share/ampliconnoise/Scripts/RunTitanium.sh
usr/share/ampliconnoise/Scripts/RunTitaniumA.sh
usr/share/ampliconnoise/Scripts/RunTitaniumFast.sh
usr/share/ampliconnoise/Scripts/RunTitaniumWeb.sh
usr/share/ampliconnoise/Scripts/Split.pl
usr/share/ampliconnoise/Scripts/SplitKeys.pl
usr/share/ampliconnoise/Scripts/SplitKeysBoth.pl
usr/share/ampliconnoise/Scripts/SplitKeysFlower.pl
usr/share/ampliconnoise/Scripts/Sub.pl
usr/share/ampliconnoise/Scripts/Subsample.sh
usr/share/ampliconnoise/Scripts/SubsampleDat.pl
usr/share/ampliconnoise/Scripts/Truncate.pl
usr/share/ampliconnoise/Scripts/Typical.pl
usr/share/doc
usr/share/doc/ampliconnoise
usr/share/doc/ampliconnoise/Doc.pdf
usr/share/doc/ampliconnoise/README.Debian
usr/share/doc/ampliconnoise/README.source
usr/share/doc/ampliconnoise/README.test
usr/share/doc/ampliconnoise/changelog.Debian.gz
usr/share/doc/ampliconnoise/copyright
usr/share/doc/ampliconnoise/examples
usr/share/doc/ampliconnoise/examples/C005.dat.xz
usr/share/doc/ampliconnoise/examples/Run.sh
usr/share/doc/ampliconnoise/run-unit-test
usr/share/doc-base
usr/share/doc-base/ampliconnoise.ampliconnoise
usr/share/man
usr/share/man/man1
usr/share/man/man1/ampliconnoise.1.gz
usr/share/man/man1/FCluster.1.gz
usr/share/man/man1/FastaUnique.1.gz
usr/share/man/man1/NDist.1.gz
usr/share/man/man1/Perseus.1.gz
usr/share/man/man1/PerseusD.1.gz
usr/share/man/man1/PyroDist.1.gz
usr/share/man/man1/PyroNoise.1.gz
usr/share/man/man1/PyroNoiseA.1.gz
usr/share/man/man1/PyroNoiseM.1.gz
usr/share/man/man1/SeqDist.1.gz
usr/share/man/man1/SeqNoise.1.gz
usr/share/man/man1/SplitClusterClust.1.gz
usr/share/man/man1/SplitClusterEven.1.gz