cct (1:1.0.3-1build1)
Details
Core information at a glance
- Distribution
- ubuntu
- Origin
- ubuntu-stonking
- Repository
- https://nl.archive.ubuntu.com/ubuntu
- Codename
- stonking
- Component
- universe
- Source
- none
- Architecture
- amd64v3
- Section
- universe/science
- Priority
- optional
- Maintainer
- Ubuntu Developers <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 36 kB
- Size expected
- 36.3 MB
- Size actual
- 36.3 MB
- Size match
Dependencies
Required package dependencies
Suggested packages
Recommended additional packages
- None
Description
visually comparing bacterial, plasmid, chloroplast, or mitochondrial sequences
Tags
Package classification tags
None
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | 6799dc73…bb2e5e91 | |
| SHA-1 | 91ef5892…f378dbef | |
| SHA-256 | aae1d1bc…41cf2548 | |
| SHA-512 | 342cff84…b18a6af0 |
Contents
Files and directories included
. etc etc/cct etc/cct/global_settings.conf etc/cct/project_settings.conf etc/cct/project_settings_cds_vs_cds.conf etc/cct/project_settings_dna_vs_dna.conf etc/cct/project_settings_multi.conf usr usr/bin usr/share usr/share/cct usr/share/cct/lib usr/share/cct/lib/scripts usr/share/cct/lib/scripts/assign_cogs usr/share/cct/lib/scripts/assign_cogs/README.md usr/share/cct/lib/scripts/assign_cogs/assign_cogs.pl usr/share/cct/lib/scripts/assign_cogs/db usr/share/cct/lib/scripts/assign_cogs/db/myva.gz usr/share/cct/lib/scripts/assign_cogs/db/whog.gz usr/share/cct/lib/scripts/assign_cogs/test.sh usr/share/cct/lib/scripts/cgview_xml_builder usr/share/cct/lib/scripts/cgview_xml_builder/README.md usr/share/cct/lib/scripts/cgview_xml_builder/cgview_xml_builder.pl usr/share/cct/lib/scripts/cgview_xml_builder/test.sh usr/share/cct/lib/scripts/convert_vcf_to_features usr/share/cct/lib/scripts/convert_vcf_to_features/README.md usr/share/cct/lib/scripts/convert_vcf_to_features/convert_vcf_to_features.pl usr/share/cct/lib/scripts/convert_vcf_to_features/test.sh usr/share/cct/lib/scripts/get_cds usr/share/cct/lib/scripts/get_cds/README.md usr/share/cct/lib/scripts/get_cds/get_cds.pl usr/share/cct/lib/scripts/get_cds/test.sh usr/share/cct/lib/scripts/get_orfs usr/share/cct/lib/scripts/get_orfs/README.md usr/share/cct/lib/scripts/get_orfs/get_orfs.pl usr/share/cct/lib/scripts/get_orfs/test.sh usr/share/cct/lib/scripts/local_blast_client usr/share/cct/lib/scripts/local_blast_client/README.md usr/share/cct/lib/scripts/local_blast_client/local_blast_client.pl usr/share/cct/lib/scripts/local_blast_client/test.sh usr/share/cct/lib/scripts/ncbi_search usr/share/cct/lib/scripts/ncbi_search/README.md usr/share/cct/lib/scripts/ncbi_search/ncbi_search.pl usr/share/cct/lib/scripts/ncbi_search/test.sh usr/share/cct/lib/scripts/sequence_to_multi_fasta usr/share/cct/lib/scripts/sequence_to_multi_fasta/README.md usr/share/cct/lib/scripts/sequence_to_multi_fasta/sequence_to_multi_fasta.pl usr/share/cct/lib/scripts/sequence_to_multi_fasta/test.sh usr/share/cct/scripts usr/share/cct/scripts/build_blast_atlas.sh usr/share/cct/scripts/build_blast_atlas_all_vs_all.sh usr/share/cct/scripts/build_cog_db.sh usr/share/cct/scripts/cgview_comparison_tool.pl usr/share/cct/scripts/check_env.sh usr/share/cct/scripts/convert_vcf_to_features.pl usr/share/cct/scripts/create_zoomed_maps.sh usr/share/cct/scripts/fetch_all_refseq_bacterial_genomes.sh usr/share/cct/scripts/fetch_all_refseq_chloroplast_genomes.sh usr/share/cct/scripts/fetch_all_refseq_mitochondrial_genomes.sh usr/share/cct/scripts/fetch_genome_by_accession.sh usr/share/cct/scripts/fetch_refseq_bacterial_genomes_by_name.sh usr/share/cct/scripts/generic usr/share/cct/scripts/ncbi_search.pl usr/share/cct/scripts/process_sample_projects.sh usr/share/cct/scripts/process_test_projects.sh usr/share/cct/scripts/redraw_maps.sh usr/share/cct/scripts/remove_long_seqs.sh usr/share/cct/scripts/remove_short_seqs.sh usr/share/doc usr/share/doc/cct usr/share/doc/cct/README.Debian usr/share/doc/cct/README.md.gz usr/share/doc/cct/README.test usr/share/doc/cct/changelog.Debian.gz usr/share/doc/cct/copyright usr/share/man usr/share/man/man1 usr/share/man/man1/build_blast_atlas.1.gz usr/share/man/man1/build_blast_atlas_all_vs_all.1.gz usr/share/man/man1/cgview_comparison_tool.1.gz usr/share/man/man1/convert_vcf_to_features.1.gz usr/share/man/man1/create_zoomed_maps.1.gz usr/share/man/man1/fetch_all_refseq_bacterial_genomes.1.gz usr/share/man/man1/fetch_all_refseq_chloroplast_genomes.1.gz usr/share/man/man1/fetch_all_refseq_mitochondrial_genomes.1.gz usr/share/man/man1/fetch_genome_by_accession.1.gz usr/share/man/man1/fetch_refseq_bacterial_genomes_by_name.1.gz usr/share/man/man1/ncbi_search.1.gz usr/share/man/man1/redraw_maps.1.gz usr/share/man/man1/remove_long_seqs.1.gz usr/share/man/man1/remove_short_seqs.1.gz usr/share/perl5 usr/share/perl5/Util usr/share/perl5/Util/Configurator.pm usr/share/perl5/Util/LogManager.pm usr/bin/build_blast_atlas usr/bin/build_blast_atlas_all_vs_all usr/bin/build_cog_db usr/bin/cgview_comparison_tool usr/bin/check_env usr/bin/convert_vcf_to_features usr/bin/create_zoomed_maps usr/bin/fetch_all_refseq_bacterial_genomes usr/bin/fetch_all_refseq_chloroplast_genomes usr/bin/fetch_all_refseq_mitochondrial_genomes usr/bin/fetch_genome_by_accession usr/bin/fetch_refseq_bacterial_genomes_by_name usr/bin/ncbi_search usr/bin/process_sample_projects usr/bin/process_test_projects usr/bin/redraw_maps usr/bin/remove_long_seqs usr/bin/remove_short_seqs usr/share/cct/conf