igor (1.4.0+dfsg-5build2)

Details

Core information at a glance

Distribution
ubuntu
Origin
ubuntu-stonking
Repository
https://nl.archive.ubuntu.com/ubuntu
Codename
stonking
Component
universe
Source
none
Architecture
amd64v3
Section
universe/science
Priority
optional
Maintainer
Ubuntu Developers <[email protected]>

Size & integrity

Byte sizes and integrity verification

Installed size
2.5 kB
Size expected
555.4 kB
Size actual
555.4 kB
Size match

Dependencies

Required package dependencies

  • libblas3 | libblas.so.3
  • libc6 (>= 2.38)
  • libgcc-s1 (>= 3.3.1)
  • libgomp1 (>= 6)
  • libgsl28 (>= 2.8+dfsg)
  • libjemalloc2 (>= 5.0.0)
  • libstdc++6 (>= 14)

Suggested packages

Recommended additional packages

  • None

Description

infers V(D)J recombination processes from sequencing data

Homepage Download .deb

Tags

Package classification tags

None

Checksums

Hash values and integrity verification status

TypeActualMatch
MD5bb0adb97…42f0b70a
SHA-1f6e2b6dc…f05698c1
SHA-25607fa755d…f328bb19
SHA-5124d8805b3…5e570fbe

Contents

Files and directories included

.
usr
usr/bin
usr/bin/igor
usr/bin/igor-compute_pgen
usr/share
usr/share/doc
usr/share/doc/igor
usr/share/doc/igor/changelog.Debian.gz
usr/share/doc/igor/copyright
usr/share/doc/igor/examples
usr/share/doc/igor/examples/genomicDs.fasta
usr/share/doc/igor/examples/genomicJs_all_curated.fasta
usr/share/doc/igor/examples/genomicVs_with_primers.fasta
usr/share/doc/igor/examples/murugan_naive1_noncoding_demo_seqs.txt
usr/share/igor
usr/share/igor/demo
usr/share/igor/demo/genomicDs.fasta
usr/share/igor/demo/genomicJs_all_curated.fasta
usr/share/igor/demo/genomicVs_with_primers.fasta
usr/share/igor/demo/murugan_naive1_noncoding_demo_seqs.txt
usr/share/igor/models
usr/share/igor/models/heavy_pen_substitution_matrix.csv
usr/share/igor/models/human
usr/share/igor/models/human/IGK
usr/share/igor/models/human/IGK/models
usr/share/igor/models/human/IGK/models/model_marginals.txt
usr/share/igor/models/human/IGK/models/model_parms.txt
usr/share/igor/models/human/IGK/ref_genome
usr/share/igor/models/human/IGK/ref_genome/J_gene_CDR3_anchors.csv
usr/share/igor/models/human/IGK/ref_genome/V_gene_CDR3_anchors.csv
usr/share/igor/models/human/IGK/ref_genome/genomicJs.fasta
usr/share/igor/models/human/IGK/ref_genome/genomicVs.fasta
usr/share/igor/models/human/IGL
usr/share/igor/models/human/IGL/models
usr/share/igor/models/human/IGL/models/model_marginals.txt
usr/share/igor/models/human/IGL/models/model_parms.txt
usr/share/igor/models/human/IGL/ref_genome
usr/share/igor/models/human/IGL/ref_genome/J_gene_CDR3_anchors.csv
usr/share/igor/models/human/IGL/ref_genome/V_gene_CDR3_anchors.csv
usr/share/igor/models/human/IGL/ref_genome/genomicJs.fasta
usr/share/igor/models/human/IGL/ref_genome/genomicVs.fasta
usr/share/igor/models/human/bcr_heavy
usr/share/igor/models/human/bcr_heavy/model.info
usr/share/igor/models/human/bcr_heavy/models
usr/share/igor/models/human/bcr_heavy/models/model_marginals.txt
usr/share/igor/models/human/bcr_heavy/models/model_parms.txt
usr/share/igor/models/human/bcr_heavy/ref_genome
usr/share/igor/models/human/bcr_heavy/ref_genome/J_gene_CDR3_anchors.csv
usr/share/igor/models/human/bcr_heavy/ref_genome/V_gene_CDR3_anchors.csv
usr/share/igor/models/human/bcr_heavy/ref_genome/genomicDs.fasta
usr/share/igor/models/human/bcr_heavy/ref_genome/genomicJs.fasta
usr/share/igor/models/human/bcr_heavy/ref_genome/genomicVs.fasta
usr/share/igor/models/human/bcr_heavy/supplementary_models
usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_3mer_D_hyperm_parms.txt
usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_3mer_J_hyperm_parms.txt
usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_3mer_V_hyperm_parms.txt
usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_5mer_D_hyperm_parms.txt
usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_5mer_J_hyperm_parms.txt
usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_5mer_V_hyperm_parms.txt
usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_7mer_D_hyperm_parms.txt
usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_7mer_J_hyperm_parms.txt
usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_7mer_V_hyperm_parms.txt
usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_9mer_D_hyperm_parms.txt
usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_9mer_J_hyperm_parms.txt
usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_9mer_V_hyperm_parms.txt
usr/share/igor/models/human/bcr_heavy/supplementary_models/models.info
usr/share/igor/models/human/tcr_alpha
usr/share/igor/models/human/tcr_alpha/model.info
usr/share/igor/models/human/tcr_alpha/models
usr/share/igor/models/human/tcr_alpha/models/model_marginals.txt
usr/share/igor/models/human/tcr_alpha/models/model_parms.txt
usr/share/igor/models/human/tcr_alpha/ref_genome
usr/share/igor/models/human/tcr_alpha/ref_genome/J_gene_CDR3_anchors.csv
usr/share/igor/models/human/tcr_alpha/ref_genome/V_gene_CDR3_anchors.csv
usr/share/igor/models/human/tcr_alpha/ref_genome/genomicJs.fasta
usr/share/igor/models/human/tcr_alpha/ref_genome/genomicVs.fasta
usr/share/igor/models/human/tcr_beta
usr/share/igor/models/human/tcr_beta/model.info
usr/share/igor/models/human/tcr_beta/models
usr/share/igor/models/human/tcr_beta/models/model_marginals.txt
usr/share/igor/models/human/tcr_beta/models/model_parms.txt
usr/share/igor/models/human/tcr_beta/ref_genome
usr/share/igor/models/human/tcr_beta/ref_genome/J_gene_CDR3_anchors.csv
usr/share/igor/models/human/tcr_beta/ref_genome/V_gene_CDR3_anchors.csv
usr/share/igor/models/human/tcr_beta/ref_genome/genomicDs.fasta
usr/share/igor/models/human/tcr_beta/ref_genome/genomicJs.fasta
usr/share/igor/models/human/tcr_beta/ref_genome/genomicVs.fasta
usr/share/igor/models/human/tcr_beta/supplementary_models
usr/share/igor/models/human/tcr_beta/supplementary_models/naive_1
usr/share/igor/models/human/tcr_beta/supplementary_models/naive_1/final_marginals.txt
usr/share/igor/models/human/tcr_beta/supplementary_models/naive_1/final_parms.txt
usr/share/igor/models/human/tcr_beta/supplementary_models/naive_1/model.info
usr/share/igor/models/human/tcr_beta/supplementary_models/naive_4
usr/share/igor/models/human/tcr_beta/supplementary_models/naive_4/final_marginals.txt
usr/share/igor/models/human/tcr_beta/supplementary_models/naive_4/final_parms.txt
usr/share/igor/models/human/tcr_beta/supplementary_models/naive_4/model.info
usr/share/igor/models/mouse
usr/share/igor/models/mouse/tcr_beta
usr/share/igor/models/mouse/tcr_beta/model.info
usr/share/igor/models/mouse/tcr_beta/models
usr/share/igor/models/mouse/tcr_beta/models/model_marginals.txt
usr/share/igor/models/mouse/tcr_beta/models/model_parms.txt
usr/share/igor/models/mouse/tcr_beta/ref_genome
usr/share/igor/models/mouse/tcr_beta/ref_genome/J_gene_CDR3_anchors.csv
usr/share/igor/models/mouse/tcr_beta/ref_genome/V_gene_CDR3_anchors.csv
usr/share/igor/models/mouse/tcr_beta/ref_genome/genomicDs.fasta
usr/share/igor/models/mouse/tcr_beta/ref_genome/genomicJs.fasta
usr/share/igor/models/mouse/tcr_beta/ref_genome/genomicVs.fasta
usr/share/man
usr/share/man/man1
usr/share/man/man1/igor.1.gz