insilicoseq (2.0.1-4)

Details

Core information at a glance

Distribution
ubuntu
Origin
ubuntu-stonking
Repository
https://nl.archive.ubuntu.com/ubuntu
Codename
stonking
Component
universe
Source
none
Architecture
amd64v3
Section
universe/science
Priority
optional
Maintainer
Ubuntu Developers <[email protected]>

Size & integrity

Byte sizes and integrity verification

Installed size
9.1 kB
Size expected
4.2 MB
Size actual
4.2 MB
Size match

Dependencies

Required package dependencies

  • python3-biopython
  • python3-numpy
  • python3-pysam
  • python3-requests
  • python3-scipy
  • python3:any

Suggested packages

Recommended additional packages

  • None

Description

sequencing simulator producing realistic Illumina reads

Tags

Package classification tags

None

Checksums

Hash values and integrity verification status

TypeActualMatch
MD53ffedab6…652c0c12
SHA-1ff55513e…aa8ef9dd
SHA-25697a67234…314c525e
SHA-512a4a83927…0db33fd4

Contents

Files and directories included

.
usr
usr/bin
usr/bin/iss
usr/lib
usr/lib/python3
usr/lib/python3/dist-packages
usr/lib/python3/dist-packages/InSilicoSeq-2.0.1.egg-info
usr/lib/python3/dist-packages/InSilicoSeq-2.0.1.egg-info/PKG-INFO
usr/lib/python3/dist-packages/InSilicoSeq-2.0.1.egg-info/dependency_links.txt
usr/lib/python3/dist-packages/InSilicoSeq-2.0.1.egg-info/entry_points.txt
usr/lib/python3/dist-packages/InSilicoSeq-2.0.1.egg-info/requires.txt
usr/lib/python3/dist-packages/InSilicoSeq-2.0.1.egg-info/top_level.txt
usr/lib/python3/dist-packages/iss
usr/lib/python3/dist-packages/iss/__init__.py
usr/lib/python3/dist-packages/iss/__main__.py
usr/lib/python3/dist-packages/iss/abundance.py
usr/lib/python3/dist-packages/iss/app.py
usr/lib/python3/dist-packages/iss/bam.py
usr/lib/python3/dist-packages/iss/download.py
usr/lib/python3/dist-packages/iss/error_models
usr/lib/python3/dist-packages/iss/error_models/__init__.py
usr/lib/python3/dist-packages/iss/error_models/basic.py
usr/lib/python3/dist-packages/iss/error_models/kde.py
usr/lib/python3/dist-packages/iss/error_models/perfect.py
usr/lib/python3/dist-packages/iss/generator.py
usr/lib/python3/dist-packages/iss/modeller.py
usr/lib/python3/dist-packages/iss/profiles
usr/lib/python3/dist-packages/iss/profiles/HiSeq
usr/lib/python3/dist-packages/iss/profiles/MiSeq
usr/lib/python3/dist-packages/iss/profiles/NovaSeq
usr/lib/python3/dist-packages/iss/profiles/miSeq_0.npz
usr/lib/python3/dist-packages/iss/profiles/miSeq_20.npz
usr/lib/python3/dist-packages/iss/profiles/miSeq_24.npz
usr/lib/python3/dist-packages/iss/profiles/miSeq_28.npz
usr/lib/python3/dist-packages/iss/profiles/miSeq_32.npz
usr/lib/python3/dist-packages/iss/profiles/miSeq_36.npz
usr/lib/python3/dist-packages/iss/profiles/nextSeq.npz
usr/lib/python3/dist-packages/iss/test
usr/lib/python3/dist-packages/iss/test/__init__.py
usr/lib/python3/dist-packages/iss/test/test_abundance.py
usr/lib/python3/dist-packages/iss/test/test_bam.py
usr/lib/python3/dist-packages/iss/test/test_download.py
usr/lib/python3/dist-packages/iss/test/test_error_model.py
usr/lib/python3/dist-packages/iss/test/test_generator.py
usr/lib/python3/dist-packages/iss/test/test_modeller.py
usr/lib/python3/dist-packages/iss/test/test_util.py
usr/lib/python3/dist-packages/iss/util.py
usr/lib/python3/dist-packages/iss/version.py
usr/share
usr/share/doc
usr/share/doc/insilicoseq
usr/share/doc/insilicoseq/README.md.gz
usr/share/doc/insilicoseq/README.test
usr/share/doc/insilicoseq/changelog.Debian.gz
usr/share/doc/insilicoseq/copyright
usr/share/doc/insilicoseq/examples
usr/share/doc/insilicoseq/examples/data
usr/share/doc/insilicoseq/examples/data/abundance.txt
usr/share/doc/insilicoseq/examples/data/bad_abundance.txt
usr/share/doc/insilicoseq/examples/data/draft.fasta
usr/share/doc/insilicoseq/examples/data/ecoli.bam
usr/share/doc/insilicoseq/examples/data/ecoli.bam.bai
usr/share/doc/insilicoseq/examples/data/ecoli.fasta
usr/share/doc/insilicoseq/examples/data/ecoli.npz
usr/share/doc/insilicoseq/examples/data/ecoli_R1.fastq
usr/share/doc/insilicoseq/examples/data/ecoli_R2.fastq
usr/share/doc/insilicoseq/examples/data/empty_file
usr/share/doc/insilicoseq/examples/data/genomes.fasta
usr/share/doc/insilicoseq/examples/data/read_only.fasta
usr/share/doc/insilicoseq/examples/data/readcounts.txt
usr/share/doc/insilicoseq/examples/data/substitutions_test.bam
usr/share/doc/insilicoseq/examples/data/substitutions_test.bam.bai
usr/share/doc/insilicoseq/examples/profiles
usr/share/doc/insilicoseq/examples/profiles/HiSeq
usr/share/doc/insilicoseq/examples/profiles/MiSeq
usr/share/doc/insilicoseq/examples/profiles/NovaSeq
usr/share/doc/insilicoseq/examples/profiles/miSeq_0.npz
usr/share/doc/insilicoseq/examples/profiles/miSeq_20.npz
usr/share/doc/insilicoseq/examples/profiles/miSeq_24.npz
usr/share/doc/insilicoseq/examples/profiles/miSeq_28.npz
usr/share/doc/insilicoseq/examples/profiles/miSeq_32.npz
usr/share/doc/insilicoseq/examples/profiles/miSeq_36.npz
usr/share/doc/insilicoseq/examples/profiles/nextSeq.npz
usr/share/doc/insilicoseq/examples/test
usr/share/doc/insilicoseq/examples/test/__init__.py
usr/share/doc/insilicoseq/examples/test/test_abundance.py
usr/share/doc/insilicoseq/examples/test/test_bam.py
usr/share/doc/insilicoseq/examples/test/test_download.py
usr/share/doc/insilicoseq/examples/test/test_error_model.py
usr/share/doc/insilicoseq/examples/test/test_generator.py
usr/share/doc/insilicoseq/examples/test/test_modeller.py
usr/share/doc/insilicoseq/examples/test/test_util.py
usr/share/doc/insilicoseq/run-unit-test
usr/share/lintian
usr/share/lintian/overrides
usr/share/lintian/overrides/insilicoseq
usr/share/man
usr/share/man/man1
usr/share/man/man1/iss.1.gz