mindthegap-examples (2.3.0-5)
Details
Core information at a glance
- Distribution
- ubuntu
- Origin
- ubuntu-stonking
- Repository
- https://nl.archive.ubuntu.com/ubuntu
- Codename
- stonking
- Component
- universe
- Source
- mindthegap
- Architecture
- amd64v3
- Section
- universe/science
- Priority
- optional
- Maintainer
- Ubuntu Developers <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 727 B
- Size expected
- 641.3 kB
- Size actual
- 641.3 kB
- Size match
Suggested packages
Recommended additional packages
- None
Description
optional scripts and example resources for mindthegap
Tags
Package classification tags
None
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | 88caaa0c…ec9256bc | |
| SHA-1 | 1c948fc9…55c11f21 | |
| SHA-256 | 3c007f66…9143719b | |
| SHA-512 | 0ff4d8fc…7cce7bef |
Contents
Files and directories included
. usr usr/share usr/share/doc usr/share/doc/mindthegap usr/share/doc/mindthegap/examples usr/share/doc/mindthegap/examples/data usr/share/doc/mindthegap/examples/data/contig-reads.fasta.gz usr/share/doc/mindthegap/examples/data/contigs.fasta.gz usr/share/doc/mindthegap/examples/data/reads_r1.fastq.gz usr/share/doc/mindthegap/examples/data/reads_r2.fastq.gz usr/share/doc/mindthegap/examples/data/reference.fasta.gz usr/share/doc/mindthegap/examples/data/regions.bed usr/share/doc/mindthegap/examples/test usr/share/doc/mindthegap/examples/test/compare_vcf.sh usr/share/doc/mindthegap/examples/test/contig_test usr/share/doc/mindthegap/examples/test/contig_test/README usr/share/doc/mindthegap/examples/test/contig_test/genome-variant.fasta.gz usr/share/doc/mindthegap/examples/test/contig_test/genome.fasta.gz usr/share/doc/mindthegap/examples/test/contig_test/gold.gfa.gz usr/share/doc/mindthegap/examples/test/contig_test/gold.info.txt usr/share/doc/mindthegap/examples/test/contig_test/gold.insertions.fasta.gz usr/share/doc/mindthegap/examples/test/contig_test/gold.log usr/share/doc/mindthegap/examples/test/contig_test/gold_seed_dictionary.fasta usr/share/doc/mindthegap/examples/test/eval.cpp.gz usr/share/doc/mindthegap/examples/test/full_test usr/share/doc/mindthegap/examples/test/full_test/README.gz usr/share/doc/mindthegap/examples/test/full_test/allele1.fasta.gz usr/share/doc/mindthegap/examples/test/full_test/allele2.fasta.gz usr/share/doc/mindthegap/examples/test/full_test/gold.bed usr/share/doc/mindthegap/examples/test/full_test/gold.breakpoints usr/share/doc/mindthegap/examples/test/full_test/gold.insertions.fasta usr/share/doc/mindthegap/examples/test/full_test/gold.insertions.vcf usr/share/doc/mindthegap/examples/test/full_test/gold.othervariants.vcf usr/share/doc/mindthegap/examples/test/full_test/gold_bed.breakpoints usr/share/doc/mindthegap/examples/test/full_test/gold_bed.info.txt usr/share/doc/mindthegap/examples/test/full_test/gold_bed.insertions.fasta usr/share/doc/mindthegap/examples/test/full_test/gold_bed.insertions.vcf usr/share/doc/mindthegap/examples/test/full_test/gold_bed.othervariants.vcf usr/share/doc/mindthegap/examples/test/full_test/gold_fill.output usr/share/doc/mindthegap/examples/test/full_test/gold_find.output usr/share/doc/mindthegap/examples/test/full_test/reference.fasta.gz usr/share/doc/mindthegap/examples/test/full_test/variants.txt usr/share/doc/mindthegap/examples/test/reads usr/share/doc/mindthegap/examples/test/reads/beginfuzzySNP.fasta.gz usr/share/doc/mindthegap/examples/test/reads/deleted.fasta.gz usr/share/doc/mindthegap/examples/test/reads/deletionfuzzy.fasta.gz usr/share/doc/mindthegap/examples/test/reads/endfuzzySNP.fasta.gz usr/share/doc/mindthegap/examples/test/reads/master.fasta.gz usr/share/doc/mindthegap/examples/test/reads/readref10K.fasta.gz usr/share/doc/mindthegap/examples/test/references usr/share/doc/mindthegap/examples/test/references/beginfuzzySNP.fasta usr/share/doc/mindthegap/examples/test/references/deleted.fasta usr/share/doc/mindthegap/examples/test/references/deleted_before_SNP.fasta usr/share/doc/mindthegap/examples/test/references/deletionfuzzy.fasta usr/share/doc/mindthegap/examples/test/references/endfuzzySNP.fasta usr/share/doc/mindthegap/examples/test/references/g10K.fasta.gz usr/share/doc/mindthegap/examples/test/references/g10K_del.fasta.gz usr/share/doc/mindthegap/examples/test/references/master.fasta usr/share/doc/mindthegap/examples/test/references/multiSNP.fasta usr/share/doc/mindthegap/examples/test/references/n_after_gap.fasta usr/share/doc/mindthegap/examples/test/references/n_before_gap.fasta usr/share/doc/mindthegap/examples/test/references/n_in_stretch.fasta usr/share/doc/mindthegap/examples/test/references/sSNP.fasta usr/share/doc/mindthegap/examples/test/scripts usr/share/doc/mindthegap/examples/test/scripts/generate_read.py usr/share/doc/mindthegap/examples/test/scripts/make_deletions.py.gz usr/share/doc/mindthegap/examples/test/scripts/make_snp_deletions.py.gz usr/share/doc/mindthegap/examples/test/simple_full_test.sh.gz usr/share/doc/mindthegap/examples/test/simple_test.sh usr/share/doc/mindthegap/examples/test/truths usr/share/doc/mindthegap/examples/test/truths/deletion.fasta usr/share/doc/mindthegap/examples/test/truths/deletionfuzzy.fasta usr/share/doc/mindthegap/examples/test/truths/insert_ref10K.fasta usr/share/doc/mindthegap/examples/test/truths/insertion.fasta usr/share/doc/mindthegap/examples/test/truths/insertion_before_SNP.fasta usr/share/doc/mindthegap/examples/test/truths/multiSNP.fasta usr/share/doc/mindthegap/examples/test/truths/multiSNP.vcf usr/share/doc/mindthegap/examples/test/truths/n_after_gap.fasta usr/share/doc/mindthegap/examples/test/truths/n_before_gap.fasta usr/share/doc/mindthegap/examples/test/truths/n_in_stretch.fasta usr/share/doc/mindthegap/examples/test/truths/sSNP.fasta usr/share/doc/mindthegap/examples/test/truths/truth_snp.vcf usr/share/doc/mindthegap/examples/test/vde.py.gz usr/share/doc/mindthegap/scripts usr/share/doc/mindthegap/scripts/jenkins usr/share/doc/mindthegap/scripts/jenkins/README usr/share/doc/mindthegap/scripts/jenkins/tool-mindthegap-build-debian7-64bits-gcc-4.7.sh.gz usr/share/doc/mindthegap/scripts/jenkins/tool-mindthegap-build-macos-10.9.5-gcc-4.2.1.sh.gz usr/share/doc/mindthegap/scripts/jenkins/tool-mindthegap-release-debian.sh.gz usr/share/doc/mindthegap/scripts/python3 usr/share/doc/mindthegap/scripts/python3/Context_genome_WG.py.gz usr/share/doc/mindthegap/scripts/python3/Inser_snp_in_ref.py usr/share/doc/mindthegap/scripts/python3/README.txt usr/share/doc/mindthegap/scripts/script_human_analysis usr/share/doc/mindthegap/scripts/script_human_analysis/Context_genome_WG.py.gz usr/share/doc/mindthegap/scripts/script_human_analysis/Inser_snp_in_ref.py usr/share/doc/mindthegap/scripts/script_human_analysis/README.txt usr/share/doc/mindthegap-examples usr/share/doc/mindthegap-examples/README.test usr/share/doc/mindthegap-examples/changelog.Debian.gz usr/share/doc/mindthegap-examples/copyright usr/share/doc/mindthegap-examples/run-unit-test