obitools (3.0.1~b26+dfsg-5build1)
Details
Core information at a glance
- Distribution
- ubuntu
- Origin
- ubuntu-stonking
- Repository
- https://nl.archive.ubuntu.com/ubuntu
- Codename
- stonking
- Component
- universe
- Source
- none
- Architecture
- amd64v3
- Section
- universe/python
- Priority
- optional
- Maintainer
- Ubuntu Developers <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 35.3 kB
- Size expected
- 6 MB
- Size actual
- 6 MB
- Size match
Dependencies
Required package dependencies
Suggested packages
Recommended additional packages
- None
Description
programs to analyze NGS data in a DNA metabarcoding context
Tags
Package classification tags
None
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | ee2e6fb6…66e205f0 | |
| SHA-1 | a5b272a0…882460ee | |
| SHA-256 | c6e795e8…34662c5e | |
| SHA-512 | fad69641…0d6a7f11 |
Contents
Files and directories included
. usr usr/bin usr/bin/obi usr/lib usr/lib/python3 usr/lib/python3/dist-packages usr/lib/python3/dist-packages/OBITools3-3.0.1b26.egg-info usr/lib/python3/dist-packages/OBITools3-3.0.1b26.egg-info/PKG-INFO usr/lib/python3/dist-packages/OBITools3-3.0.1b26.egg-info/dependency_links.txt usr/lib/python3/dist-packages/OBITools3-3.0.1b26.egg-info/top_level.txt usr/lib/python3/dist-packages/obitools3 usr/lib/python3/dist-packages/obitools3/__init__.py usr/lib/python3/dist-packages/obitools3/apps usr/lib/python3/dist-packages/obitools3/apps/__init__.py usr/lib/python3/dist-packages/obitools3/apps/arguments.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/apps/command.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/apps/config.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/apps/logging.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/apps/optiongroups usr/lib/python3/dist-packages/obitools3/apps/optiongroups/__init__.py usr/lib/python3/dist-packages/obitools3/apps/progress.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/apps/temp.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/commands usr/lib/python3/dist-packages/obitools3/commands/__init__.py usr/lib/python3/dist-packages/obitools3/commands/addtaxids.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/commands/align.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/commands/alignpairedend.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/commands/annotate.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/commands/build_ref_db.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/commands/cat.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/commands/clean.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/commands/clean_dms.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/commands/count.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/commands/ecopcr.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/commands/ecotag.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/commands/export.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/commands/grep.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/commands/head.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/commands/history.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/commands/import.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/commands/less.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/commands/ls.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/commands/ngsfilter.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/commands/rm.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/commands/sort.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/commands/split.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/commands/stats.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/commands/tail.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/commands/taxonomy.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/commands/test.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/commands/uniq.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/dms usr/lib/python3/dist-packages/obitools3/dms/__init__.py usr/lib/python3/dist-packages/obitools3/dms/capi usr/lib/python3/dist-packages/obitools3/dms/capi/__init__.py usr/lib/python3/dist-packages/obitools3/dms/column usr/lib/python3/dist-packages/obitools3/dms/column/__init__.py usr/lib/python3/dist-packages/obitools3/dms/column/column.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/dms/column/column_idx.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/dms/column/typed_column usr/lib/python3/dist-packages/obitools3/dms/column/typed_column/__init__.py usr/lib/python3/dist-packages/obitools3/dms/column/typed_column/bool.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/dms/column/typed_column/char.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/dms/column/typed_column/float.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/dms/column/typed_column/int.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/dms/column/typed_column/qual.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/dms/column/typed_column/seq.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/dms/column/typed_column/str.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/dms/dms.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/dms/obiseq.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/dms/object.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/dms/taxo usr/lib/python3/dist-packages/obitools3/dms/taxo/__init__.py usr/lib/python3/dist-packages/obitools3/dms/taxo/taxo.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/dms/view usr/lib/python3/dist-packages/obitools3/dms/view/__init__.py usr/lib/python3/dist-packages/obitools3/dms/view/typed_view usr/lib/python3/dist-packages/obitools3/dms/view/typed_view/__init__.py usr/lib/python3/dist-packages/obitools3/dms/view/typed_view/view_NUC_SEQS.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/dms/view/view.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/files usr/lib/python3/dist-packages/obitools3/files/__init__.py usr/lib/python3/dist-packages/obitools3/files/linebuffer.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/files/uncompress.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/files/universalopener.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/format usr/lib/python3/dist-packages/obitools3/format/__init__.py usr/lib/python3/dist-packages/obitools3/format/fasta.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/format/fastq.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/format/header.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/format/tab.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/libalign usr/lib/python3/dist-packages/obitools3/libalign/__init__.py usr/lib/python3/dist-packages/obitools3/libalign/_assemble.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/libalign/_dynamic.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/libalign/_freeendgap.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/libalign/_freeendgapfm.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/libalign/_nws.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/libalign/_qsassemble.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/libalign/_qsrassemble.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/libalign/_rassemble.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/libalign/_solexapairend.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/libalign/apat_pattern.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/libalign/shifted_ali.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/libalign/solexapairend.py usr/lib/python3/dist-packages/obitools3/parsers usr/lib/python3/dist-packages/obitools3/parsers/__init__.py usr/lib/python3/dist-packages/obitools3/parsers/embl.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/parsers/embl_genbank_features.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/parsers/fasta.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/parsers/fastq.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/parsers/genbank.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/parsers/header.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/parsers/ngsfilter.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/parsers/tab.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/parsers/universal.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/uri usr/lib/python3/dist-packages/obitools3/uri/__init__.py usr/lib/python3/dist-packages/obitools3/uri/decode.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/utils.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/version.py usr/lib/python3/dist-packages/obitools3/writers usr/lib/python3/dist-packages/obitools3/writers/__init__.py usr/lib/python3/dist-packages/obitools3/writers/fasta.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/writers/fastq.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/obitools3/writers/tab.cpython-314-x86_64-linux-gnu.so usr/lib/x86_64-linux-gnu usr/lib/x86_64-linux-gnu/libcobitools3.so usr/share usr/share/doc usr/share/doc/obitools usr/share/doc/obitools/NEWS.Debian.gz usr/share/doc/obitools/changelog.Debian.gz usr/share/doc/obitools/copyright usr/share/doc/obitools/examples usr/share/doc/obitools/examples/wolf_tutorial usr/share/doc/obitools/examples/wolf_tutorial/README.txt usr/share/doc/obitools/examples/wolf_tutorial/wolf_F.fastq usr/share/doc/obitools/examples/wolf_tutorial/wolf_R.fastq usr/share/doc/obitools/examples/wolf_tutorial/wolf_diet_ngsfilter.txt