ont-fast5-api (4.1.3+dfsg-5)

Details

Core information at a glance

Distribution
ubuntu
Origin
ubuntu-stonking
Repository
https://nl.archive.ubuntu.com/ubuntu
Codename
stonking
Component
universe
Source
none
Architecture
amd64v3
Section
universe/science
Priority
optional
Maintainer
Ubuntu Developers <[email protected]>

Size & integrity

Byte sizes and integrity verification

Installed size
254 B
Size expected
55.2 kB
Size actual
55.2 kB
Size match

Dependencies

Required package dependencies

  • libc6 (>= 2.14)
  • libgcc-s1 (>= 3.3.1)
  • libstdc++6 (>= 13.1)
  • libzstd1 (>= 1.5.5)
  • python3 (<< 3.15)
  • python3 (>= 3.14~)
  • python3-h5py (>= 3)
  • python3-numpy
  • python3-packaging
  • python3-progressbar
  • python3:any
  • libvbz-hdf-plugin-dev

Suggested packages

Recommended additional packages

  • None

Description

simple interface to HDF5 files of the Oxford Nanopore .fast5 file format

Tags

Package classification tags

None

Checksums

Hash values and integrity verification status

TypeActualMatch
MD5f7a0b168…75203454
SHA-1c69d0c95…10aedbcc
SHA-256e2a9bee6…40ce50d8
SHA-512c8d004eb…2dde5501

Contents

Files and directories included

.
usr
usr/bin
usr/bin/check_compression
usr/bin/compress_fast5
usr/bin/demux_fast5
usr/bin/fast5_subset
usr/bin/multi_to_single_fast5
usr/bin/single_to_multi_fast5
usr/lib
usr/lib/python3
usr/lib/python3/dist-packages
usr/lib/python3/dist-packages/ont_fast5_api
usr/lib/python3/dist-packages/ont_fast5_api/__init__.py
usr/lib/python3/dist-packages/ont_fast5_api/analysis_tools
usr/lib/python3/dist-packages/ont_fast5_api/analysis_tools/__init__.py
usr/lib/python3/dist-packages/ont_fast5_api/analysis_tools/alignment.py
usr/lib/python3/dist-packages/ont_fast5_api/analysis_tools/base_tool.py
usr/lib/python3/dist-packages/ont_fast5_api/analysis_tools/basecall_1d.py
usr/lib/python3/dist-packages/ont_fast5_api/analysis_tools/basecall_2d.py
usr/lib/python3/dist-packages/ont_fast5_api/analysis_tools/event_detection.py
usr/lib/python3/dist-packages/ont_fast5_api/analysis_tools/segmentation.py
usr/lib/python3/dist-packages/ont_fast5_api/compression_settings.py
usr/lib/python3/dist-packages/ont_fast5_api/conversion_tools
usr/lib/python3/dist-packages/ont_fast5_api/conversion_tools/__init__.py
usr/lib/python3/dist-packages/ont_fast5_api/conversion_tools/check_file_compression.py
usr/lib/python3/dist-packages/ont_fast5_api/conversion_tools/compress_fast5.py
usr/lib/python3/dist-packages/ont_fast5_api/conversion_tools/conversion_utils.py
usr/lib/python3/dist-packages/ont_fast5_api/conversion_tools/demux_fast5.py
usr/lib/python3/dist-packages/ont_fast5_api/conversion_tools/fast5_subset.py
usr/lib/python3/dist-packages/ont_fast5_api/conversion_tools/multi_to_single_fast5.py
usr/lib/python3/dist-packages/ont_fast5_api/conversion_tools/single_to_multi_fast5.py
usr/lib/python3/dist-packages/ont_fast5_api/data_sanitisation.py
usr/lib/python3/dist-packages/ont_fast5_api/fast5_file.py
usr/lib/python3/dist-packages/ont_fast5_api/fast5_info.py
usr/lib/python3/dist-packages/ont_fast5_api/fast5_interface.py
usr/lib/python3/dist-packages/ont_fast5_api/fast5_read.py
usr/lib/python3/dist-packages/ont_fast5_api/helpers.py
usr/lib/python3/dist-packages/ont_fast5_api/multi_fast5.py
usr/lib/python3/dist-packages/ont_fast5_api/static_data.py
usr/lib/python3/dist-packages/ont_fast5_api/vbz_plugin
usr/lib/python3/dist-packages/ont_fast5_api/vbz_plugin/libvbz_hdf_plugin.cpython-314-x86_64-linux-gnu.so
usr/lib/python3/dist-packages/ont_fast5_api-4.1.3.egg-info
usr/lib/python3/dist-packages/ont_fast5_api-4.1.3.egg-info/PKG-INFO
usr/lib/python3/dist-packages/ont_fast5_api-4.1.3.egg-info/dependency_links.txt
usr/lib/python3/dist-packages/ont_fast5_api-4.1.3.egg-info/entry_points.txt
usr/lib/python3/dist-packages/ont_fast5_api-4.1.3.egg-info/requires.txt
usr/lib/python3/dist-packages/ont_fast5_api-4.1.3.egg-info/top_level.txt
usr/share
usr/share/doc
usr/share/doc/ont-fast5-api
usr/share/doc/ont-fast5-api/changelog.Debian.gz
usr/share/doc/ont-fast5-api/copyright