pftools (3.2.12-1)
Details
Core information at a glance
- Distribution
- ubuntu
- Origin
- ubuntu-stonking
- Repository
- https://nl.archive.ubuntu.com/ubuntu
- Codename
- stonking
- Component
- universe
- Source
- none
- Architecture
- amd64v3
- Section
- universe/science
- Priority
- optional
- Maintainer
- Ubuntu Developers <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 52.6 kB
- Size expected
- 24.8 MB
- Size actual
- 24.8 MB
- Size match
Dependencies
Required package dependencies
Suggested packages
Recommended additional packages
- None
Description
build and search protein and DNA generalized profiles
Tags
Package classification tags
None
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | b553a6fe…0c1d1b4e | |
| SHA-1 | 083f982e…0e4f7927 | |
| SHA-256 | 5402edca…5becbf8e | |
| SHA-512 | d3ccee89…cb4fd55a |
Contents
Files and directories included
. usr usr/bin usr/bin/2ft usr/bin/6ft usr/bin/compare_2_profiles.pl usr/bin/fasta_to_fastq.pl usr/bin/make_iupac_cmp.pl usr/bin/pfcalibrateV3 usr/bin/pfdump usr/bin/pfemit usr/bin/pfgtop usr/bin/pfhtop usr/bin/pfindex usr/bin/pfmake usr/bin/pfpam usr/bin/pfscale usr/bin/pfscan usr/bin/pfscanV3 usr/bin/pfsearch usr/bin/pfsearchV3 usr/bin/pfw usr/bin/ps_scan.pl usr/bin/psa2msa usr/bin/ptof usr/bin/ptoh usr/bin/scramble_fasta.pl usr/bin/sort_fasta.pl usr/bin/split_profile_file.pl usr/share usr/share/doc usr/share/doc/pftools usr/share/doc/pftools/README.Debian usr/share/doc/pftools/README.md.gz usr/share/doc/pftools/README.pftools.v2.3.md.gz usr/share/doc/pftools/README.test usr/share/doc/pftools/btt129.pdf.gz usr/share/doc/pftools/changelog.Debian.gz usr/share/doc/pftools/copyright usr/share/doc/pftools/examples usr/share/doc/pftools/examples/16S.prf usr/share/doc/pftools/examples/CMakeLists.txt usr/share/doc/pftools/examples/CVPBR322.embl usr/share/doc/pftools/examples/Calibration usr/share/doc/pftools/examples/Calibration/reversed.seq usr/share/doc/pftools/examples/Calibration/window20.seq usr/share/doc/pftools/examples/FamilyProfile usr/share/doc/pftools/examples/FamilyProfile/DoubleProfile.prf usr/share/doc/pftools/examples/FamilyProfile/sequence.seq usr/share/doc/pftools/examples/FamilyProfile/sh2.prf usr/share/doc/pftools/examples/GTPA_HUMAN.dat usr/share/doc/pftools/examples/MYSA_HUMAN usr/share/doc/pftools/examples/Matrices usr/share/doc/pftools/examples/Matrices/blosum100.cmp usr/share/doc/pftools/examples/Matrices/blosum30.cmp usr/share/doc/pftools/examples/Matrices/blosum45.cmp usr/share/doc/pftools/examples/Matrices/blosum50.cmp usr/share/doc/pftools/examples/Matrices/blosum62.cmp usr/share/doc/pftools/examples/Matrices/blosum65.cmp usr/share/doc/pftools/examples/Matrices/blosum80.cmp usr/share/doc/pftools/examples/Matrices/dna_50_40.cmp usr/share/doc/pftools/examples/Matrices/gonnet.cmp usr/share/doc/pftools/examples/Matrices/iupac_50_40.cmp usr/share/doc/pftools/examples/Matrices/pam120.cmp usr/share/doc/pftools/examples/Matrices/pam160.cmp usr/share/doc/pftools/examples/Matrices/pam200.cmp usr/share/doc/pftools/examples/Matrices/pam220.cmp usr/share/doc/pftools/examples/Matrices/pam250.cmp usr/share/doc/pftools/examples/Matrices/pam30.cmp usr/share/doc/pftools/examples/Matrices/pam40.cmp usr/share/doc/pftools/examples/Matrices/pam400.cmp usr/share/doc/pftools/examples/Matrices/pam80.cmp usr/share/doc/pftools/examples/PS00741_PS50010.dat usr/share/doc/pftools/examples/R76849.seq usr/share/doc/pftools/examples/RF00177.msa usr/share/doc/pftools/examples/SRR9619541.sample.fastq usr/share/doc/pftools/examples/Toolbox.pm usr/share/doc/pftools/examples/VAV_HUMAN.seq usr/share/doc/pftools/examples/VAV_RAT.seq usr/share/doc/pftools/examples/all.prf usr/share/doc/pftools/examples/all.seq usr/share/doc/pftools/examples/coils.prf usr/share/doc/pftools/examples/ecp.prf usr/share/doc/pftools/examples/hiv.fastq usr/share/doc/pftools/examples/hiv.prf usr/share/doc/pftools/examples/htop_issue.hmm usr/share/doc/pftools/examples/patterns usr/share/doc/pftools/examples/patterns/ambiguities.hit usr/share/doc/pftools/examples/patterns/ambiguities_excluded.hit usr/share/doc/pftools/examples/patterns/anchorC.hit usr/share/doc/pftools/examples/patterns/anchorN.hit usr/share/doc/pftools/examples/patterns/fully_defined.hit usr/share/doc/pftools/examples/patterns/multiple_matches.hit usr/share/doc/pftools/examples/patterns/repetition.hit usr/share/doc/pftools/examples/patterns/repetition_range.hit usr/share/doc/pftools/examples/patterns/undefined.hit usr/share/doc/pftools/examples/pfam_sh3.hmm usr/share/doc/pftools/examples/prosite13.prf usr/share/doc/pftools/examples/rand_dna.prf usr/share/doc/pftools/examples/rand_dna.seq usr/share/doc/pftools/examples/reverse usr/share/doc/pftools/examples/reverse/forward.msa usr/share/doc/pftools/examples/reverse/forward.prf usr/share/doc/pftools/examples/reverse/forward.seq usr/share/doc/pftools/examples/reverse/forward_dna.seq usr/share/doc/pftools/examples/reverse/forward_dna_shift5.seq usr/share/doc/pftools/examples/reverse/reverse.msa usr/share/doc/pftools/examples/reverse/reverse.prf usr/share/doc/pftools/examples/reverse/reverse.seq usr/share/doc/pftools/examples/sample.fastq usr/share/doc/pftools/examples/score.lis usr/share/doc/pftools/examples/sh2.prf usr/share/doc/pftools/examples/sh3.gpr usr/share/doc/pftools/examples/sh3.msf usr/share/doc/pftools/examples/sh3.prf usr/share/doc/pftools/examples/sh3.seq usr/share/doc/pftools/examples/standard.random usr/share/doc/pftools/examples/test_V2.sh usr/share/doc/pftools/examples/test_V3.out usr/share/doc/pftools/examples/test_V3.sh usr/share/doc/pftools/examples/test_V3_output.sh.cmake usr/share/doc/pftools/examples/test_pfsearchV3_iupac.pl usr/share/doc/pftools/examples/test_pfsearchV3_pattern-regexp.sh.cmake usr/share/doc/pftools/examples/test_scan_search.pl usr/share/doc/pftools/posterPfsearchV3SIBdays2013_v0.3.pdf.gz usr/share/doc/pftools/profile.pdf.gz usr/share/doc/pftools/profile.txt.gz usr/share/doc/pftools/run-unit-test usr/share/lintian usr/share/lintian/overrides usr/share/lintian/overrides/pftools usr/share/man usr/share/man/man1 usr/share/man/man1/2ft.1.gz usr/share/man/man1/6ft.1.gz usr/share/man/man1/pfdump.1.gz usr/share/man/man1/pfgtop.1.gz usr/share/man/man1/pfhtop.1.gz usr/share/man/man1/pfmake.1.gz usr/share/man/man1/pfscale.1.gz usr/share/man/man1/pfscan.1.gz usr/share/man/man1/pfsearch.1.gz usr/share/man/man1/pfsearchV2.1.gz usr/share/man/man1/pfsearchV3.1.gz usr/share/man/man1/pfw.1.gz usr/share/man/man1/psa2msa.1.gz usr/share/man/man1/ptof.1.gz usr/share/man/man1/ptoh.1.gz usr/share/man/man5 usr/share/man/man5/psa.5.gz usr/share/man/man5/xpsa.5.gz