python3-cyvcf2 (0.32.0-1)

Details

Core information at a glance

Distribution
ubuntu
Origin
ubuntu-stonking
Repository
https://nl.archive.ubuntu.com/ubuntu
Codename
stonking
Component
universe
Source
cyvcf2
Architecture
amd64v3
Section
universe/python
Priority
optional
Maintainer
Ubuntu Developers <[email protected]>

Size & integrity

Byte sizes and integrity verification

Installed size
5.5 kB
Size expected
916.3 kB
Size actual
916.3 kB
Size match

Dependencies

Required package dependencies

  • python3-numpy2-abi0 | python3-numpy-abi9
  • python3 (<< 3.15)
  • python3 (>= 3.14~)
  • python3-click
  • python3-coloredlogs
  • python3-numpy
  • python3:any
  • libc6 (>= 2.38)
  • libhts3t64 (>= 1.17)

Suggested packages

Recommended additional packages

  • None

Description

VCF parser based on htslib (Python 3)

Tags

Package classification tags

None

Checksums

Hash values and integrity verification status

TypeActualMatch
MD550ce6f93…4db40f57
SHA-1acf027da…3d1fe191
SHA-25690147d59…cfd836ea
SHA-5121036c713…50145096

Contents

Files and directories included

.
usr
usr/bin
usr/bin/cyvcf2
usr/lib
usr/lib/python3
usr/lib/python3/dist-packages
usr/lib/python3/dist-packages/cyvcf2
usr/lib/python3/dist-packages/cyvcf2/__init__.py
usr/lib/python3/dist-packages/cyvcf2/__main__.py
usr/lib/python3/dist-packages/cyvcf2/cli.py
usr/lib/python3/dist-packages/cyvcf2/cyvcf2.c
usr/lib/python3/dist-packages/cyvcf2/cyvcf2.cpython-314-x86_64-linux-gnu.so
usr/lib/python3/dist-packages/cyvcf2/cyvcf2.pxd
usr/lib/python3/dist-packages/cyvcf2/cyvcf2.pyx
usr/lib/python3/dist-packages/cyvcf2/helpers.c
usr/lib/python3/dist-packages/cyvcf2/helpers.h
usr/lib/python3/dist-packages/cyvcf2/relatedness.h
usr/lib/python3/dist-packages/cyvcf2/tests
usr/lib/python3/dist-packages/cyvcf2/tests/__init__.py
usr/lib/python3/dist-packages/cyvcf2/tests/bug.vcf.gz
usr/lib/python3/dist-packages/cyvcf2/tests/decomposed.vcf
usr/lib/python3/dist-packages/cyvcf2/tests/empty.vcf
usr/lib/python3/dist-packages/cyvcf2/tests/issue_198.vcf
usr/lib/python3/dist-packages/cyvcf2/tests/issue_44.vcf
usr/lib/python3/dist-packages/cyvcf2/tests/multi-contig.bcf
usr/lib/python3/dist-packages/cyvcf2/tests/multi-contig.bcf.csi
usr/lib/python3/dist-packages/cyvcf2/tests/multi-contig.vcf.gz
usr/lib/python3/dist-packages/cyvcf2/tests/multi-contig.vcf.gz.csi
usr/lib/python3/dist-packages/cyvcf2/tests/multi-contig.vcf.gz.tbi
usr/lib/python3/dist-packages/cyvcf2/tests/no-seq-len.vcf
usr/lib/python3/dist-packages/cyvcf2/tests/no-seq-names.vcf
usr/lib/python3/dist-packages/cyvcf2/tests/o.vcf.gz
usr/lib/python3/dist-packages/cyvcf2/tests/seg.vcf.gz
usr/lib/python3/dist-packages/cyvcf2/tests/test-alt-repr.vcf
usr/lib/python3/dist-packages/cyvcf2/tests/test-diff.csi
usr/lib/python3/dist-packages/cyvcf2/tests/test-format-string.vcf
usr/lib/python3/dist-packages/cyvcf2/tests/test-genotypes.vcf
usr/lib/python3/dist-packages/cyvcf2/tests/test-haploidX.vcf
usr/lib/python3/dist-packages/cyvcf2/tests/test-hemi.vcf
usr/lib/python3/dist-packages/cyvcf2/tests/test-invalid-header.vcf
usr/lib/python3/dist-packages/cyvcf2/tests/test-multiallelic-homozygous-alt.vcf.gz
usr/lib/python3/dist-packages/cyvcf2/tests/test-multiallelic-homozygous-alt.vcf.gz.tbi
usr/lib/python3/dist-packages/cyvcf2/tests/test-no-genotypes.vcf
usr/lib/python3/dist-packages/cyvcf2/tests/test-strict-gt-option-flag.vcf.gz
usr/lib/python3/dist-packages/cyvcf2/tests/test-strict-gt-option-flag.vcf.gz.tbi
usr/lib/python3/dist-packages/cyvcf2/tests/test.bug.117.vcf
usr/lib/python3/dist-packages/cyvcf2/tests/test.comp_het.3.vcf
usr/lib/python3/dist-packages/cyvcf2/tests/test.isa.vcf
usr/lib/python3/dist-packages/cyvcf2/tests/test.mnp.vcf
usr/lib/python3/dist-packages/cyvcf2/tests/test.snpeff.bcf
usr/lib/python3/dist-packages/cyvcf2/tests/test.snpeff.bcf.csi
usr/lib/python3/dist-packages/cyvcf2/tests/test.snpeff.vcf
usr/lib/python3/dist-packages/cyvcf2/tests/test.vcf.gz
usr/lib/python3/dist-packages/cyvcf2/tests/test.vcf.gz.tbi
usr/lib/python3/dist-packages/cyvcf2/tests/test_cli.py
usr/lib/python3/dist-packages/cyvcf2/tests/test_gt_alt_freqs.vcf
usr/lib/python3/dist-packages/cyvcf2/tests/test_gt_bases.vcf.gz
usr/lib/python3/dist-packages/cyvcf2/tests/test_hemi.py
usr/lib/python3/dist-packages/cyvcf2/tests/test_reader.py
usr/lib/python3/dist-packages/cyvcf2/tests/test_writer.py
usr/lib/python3/dist-packages/cyvcf2-0.32.0.egg-info
usr/lib/python3/dist-packages/cyvcf2-0.32.0.egg-info/PKG-INFO
usr/lib/python3/dist-packages/cyvcf2-0.32.0.egg-info/dependency_links.txt
usr/lib/python3/dist-packages/cyvcf2-0.32.0.egg-info/entry_points.txt
usr/lib/python3/dist-packages/cyvcf2-0.32.0.egg-info/not-zip-safe
usr/lib/python3/dist-packages/cyvcf2-0.32.0.egg-info/requires.txt
usr/lib/python3/dist-packages/cyvcf2-0.32.0.egg-info/top_level.txt
usr/share
usr/share/doc
usr/share/doc/python3-cyvcf2
usr/share/doc/python3-cyvcf2/changelog.Debian.gz
usr/share/doc/python3-cyvcf2/copyright
usr/share/man
usr/share/man/man1
usr/share/man/man1/cyvcf2.1.gz