python3-sqt (0.8.0-9build2)

Details

Core information at a glance

Distribution
ubuntu
Origin
ubuntu-stonking
Repository
https://nl.archive.ubuntu.com/ubuntu
Codename
stonking
Component
universe
Source
python-sqt
Architecture
amd64v3
Section
universe/python
Priority
optional
Maintainer
Ubuntu Developers <[email protected]>

Size & integrity

Byte sizes and integrity verification

Installed size
438 B
Size expected
139.5 kB
Size actual
139.5 kB
Size match

Dependencies

Required package dependencies

  • libc6 (>= 2.14)
  • python3 (<< 3.15)
  • python3 (>= 3.14~)
  • python3-cutadapt
  • python3-matplotlib
  • python3-pysam
  • python3-seaborn
  • python3-xopen
  • python3:any

Suggested packages

Recommended additional packages

  • None

Description

SeQuencing Tools for biological DNA/RNA high-throughput data

Tags

Package classification tags

None

Checksums

Hash values and integrity verification status

TypeActualMatch
MD57fa19bbb…5bb42df6
SHA-10c5a159a…f317a154
SHA-256f38bc747…0ddea753
SHA-5127eeb0f81…5357191c

Contents

Files and directories included

.
usr
usr/bin
usr/bin/sqt
usr/lib
usr/lib/python3
usr/lib/python3/dist-packages
usr/lib/python3/dist-packages/sqt
usr/lib/python3/dist-packages/sqt/__init__.py
usr/lib/python3/dist-packages/sqt/__main__.py
usr/lib/python3/dist-packages/sqt/_codons.py
usr/lib/python3/dist-packages/sqt/_helpers.cpython-314-x86_64-linux-gnu.so
usr/lib/python3/dist-packages/sqt/_version.py
usr/lib/python3/dist-packages/sqt/align.py
usr/lib/python3/dist-packages/sqt/ansicolor.py
usr/lib/python3/dist-packages/sqt/args.py
usr/lib/python3/dist-packages/sqt/cigar.py
usr/lib/python3/dist-packages/sqt/colorspace.py
usr/lib/python3/dist-packages/sqt/commands
usr/lib/python3/dist-packages/sqt/commands/__init__.py
usr/lib/python3/dist-packages/sqt/commands/addadapt.py
usr/lib/python3/dist-packages/sqt/commands/align.py
usr/lib/python3/dist-packages/sqt/commands/bam2fastq.py
usr/lib/python3/dist-packages/sqt/commands/bameof.py
usr/lib/python3/dist-packages/sqt/commands/bamstats.py
usr/lib/python3/dist-packages/sqt/commands/chars.py
usr/lib/python3/dist-packages/sqt/commands/checkfastqpe.py
usr/lib/python3/dist-packages/sqt/commands/checkvcfref.py
usr/lib/python3/dist-packages/sqt/commands/compare_sequences.py
usr/lib/python3/dist-packages/sqt/commands/coverage.py
usr/lib/python3/dist-packages/sqt/commands/cutvect.py
usr/lib/python3/dist-packages/sqt/commands/fastaextract.py
usr/lib/python3/dist-packages/sqt/commands/fastagrep.py
usr/lib/python3/dist-packages/sqt/commands/fastastats.py
usr/lib/python3/dist-packages/sqt/commands/fastxmod.py
usr/lib/python3/dist-packages/sqt/commands/fixbam64.py
usr/lib/python3/dist-packages/sqt/commands/histogram.py
usr/lib/python3/dist-packages/sqt/commands/mutate.py
usr/lib/python3/dist-packages/sqt/commands/qgramfreq.py
usr/lib/python3/dist-packages/sqt/commands/qualityguess.py
usr/lib/python3/dist-packages/sqt/commands/randomseq.py
usr/lib/python3/dist-packages/sqt/commands/readcov.py
usr/lib/python3/dist-packages/sqt/commands/readlenhisto.py
usr/lib/python3/dist-packages/sqt/commands/samfixn.py
usr/lib/python3/dist-packages/sqt/commands/samsetop.py
usr/lib/python3/dist-packages/sqt/commands/simreads.py
usr/lib/python3/dist-packages/sqt/commands/translate.py
usr/lib/python3/dist-packages/sqt/compat.py
usr/lib/python3/dist-packages/sqt/dna.py
usr/lib/python3/dist-packages/sqt/intervaltree.py
usr/lib/python3/dist-packages/sqt/io
usr/lib/python3/dist-packages/sqt/io/__init__.py
usr/lib/python3/dist-packages/sqt/io/bam.py
usr/lib/python3/dist-packages/sqt/io/fasta.py
usr/lib/python3/dist-packages/sqt/io/gtf.py
usr/lib/python3/dist-packages/sqt/io/sff.py
usr/lib/python3/dist-packages/sqt/math.py
usr/lib/python3/dist-packages/sqt/qualtrim.py
usr/lib/python3/dist-packages/sqt/reads.py
usr/lib/python3/dist-packages/sqt/region.py
usr/lib/python3/dist-packages/sqt/utils.py
usr/lib/python3/dist-packages/sqt-0.8.0.egg-info
usr/lib/python3/dist-packages/sqt-0.8.0.egg-info/PKG-INFO
usr/lib/python3/dist-packages/sqt-0.8.0.egg-info/dependency_links.txt
usr/lib/python3/dist-packages/sqt-0.8.0.egg-info/entry_points.txt
usr/lib/python3/dist-packages/sqt-0.8.0.egg-info/requires.txt
usr/lib/python3/dist-packages/sqt-0.8.0.egg-info/top_level.txt
usr/share
usr/share/doc
usr/share/doc/python3-sqt
usr/share/doc/python3-sqt/README.Debian
usr/share/doc/python3-sqt/changelog.Debian.gz
usr/share/doc/python3-sqt/copyright
usr/share/man
usr/share/man/man1
usr/share/man/man1/sqt.1.gz