r-bioc-titancna (1.44.0-3)

Details

Core information at a glance

Distribution
ubuntu
Origin
ubuntu-stonking
Repository
https://nl.archive.ubuntu.com/ubuntu
Codename
stonking
Component
universe
Source
none
Architecture
amd64v3
Section
universe/gnu-r
Priority
optional
Maintainer
Ubuntu Developers <[email protected]>

Size & integrity

Byte sizes and integrity verification

Installed size
7.7 kB
Size expected
4.1 MB
Size actual
4.1 MB
Size match

Dependencies

Required package dependencies

  • r-api-4.0
  • r-api-bioc-3.20
  • r-bioc-biocgenerics (>= 0.31.6)
  • r-bioc-iranges (>= 2.6.1)
  • r-bioc-genomicranges (>= 1.24.3)
  • r-bioc-variantannotation (>= 1.18.7)
  • r-cran-foreach (>= 1.4.3)
  • r-bioc-genomeinfodb (>= 1.8.7)
  • r-cran-data.table (>= 1.10.4)
  • r-cran-dplyr (>= 0.5.0)
  • libc6 (>= 2.14)

Suggested packages

Recommended additional packages

  • None

Description

Subclonal copy number and LOH prediction from whole genome sequencing

Homepage Download .deb

Tags

Package classification tags

None

Checksums

Hash values and integrity verification status

TypeActualMatch
MD572414cb8…fbc63e5b
SHA-177dc6b91…33ffdc8c
SHA-25683281f49…e08220a7
SHA-512a4ddfa01…6c019705

Contents

Files and directories included

.
usr
usr/lib
usr/lib/R
usr/lib/R/site-library
usr/lib/R/site-library/TitanCNA
usr/lib/R/site-library/TitanCNA/CITATION
usr/lib/R/site-library/TitanCNA/DESCRIPTION
usr/lib/R/site-library/TitanCNA/INDEX
usr/lib/R/site-library/TitanCNA/Meta
usr/lib/R/site-library/TitanCNA/Meta/Rd.rds
usr/lib/R/site-library/TitanCNA/Meta/data.rds
usr/lib/R/site-library/TitanCNA/Meta/features.rds
usr/lib/R/site-library/TitanCNA/Meta/hsearch.rds
usr/lib/R/site-library/TitanCNA/Meta/links.rds
usr/lib/R/site-library/TitanCNA/Meta/nsInfo.rds
usr/lib/R/site-library/TitanCNA/Meta/package.rds
usr/lib/R/site-library/TitanCNA/Meta/vignette.rds
usr/lib/R/site-library/TitanCNA/NAMESPACE
usr/lib/R/site-library/TitanCNA/NEWS
usr/lib/R/site-library/TitanCNA/R
usr/lib/R/site-library/TitanCNA/R/TitanCNA
usr/lib/R/site-library/TitanCNA/R/TitanCNA.rdb
usr/lib/R/site-library/TitanCNA/R/TitanCNA.rdx
usr/lib/R/site-library/TitanCNA/data
usr/lib/R/site-library/TitanCNA/data/EMresults.rda
usr/lib/R/site-library/TitanCNA/data/datalist
usr/lib/R/site-library/TitanCNA/doc
usr/lib/R/site-library/TitanCNA/doc/TitanCNA.R
usr/lib/R/site-library/TitanCNA/doc/TitanCNA.Rnw
usr/lib/R/site-library/TitanCNA/doc/TitanCNA.pdf
usr/lib/R/site-library/TitanCNA/doc/index.html
usr/lib/R/site-library/TitanCNA/extdata
usr/lib/R/site-library/TitanCNA/extdata/Seqinfo_hg19.rda
usr/lib/R/site-library/TitanCNA/extdata/gc_chr2.wig
usr/lib/R/site-library/TitanCNA/extdata/map_chr2.wig
usr/lib/R/site-library/TitanCNA/extdata/test_alleleCounts_chr2.txt
usr/lib/R/site-library/TitanCNA/extdata/test_norm_chr2.wig
usr/lib/R/site-library/TitanCNA/extdata/test_tum_chr2.wig
usr/lib/R/site-library/TitanCNA/help
usr/lib/R/site-library/TitanCNA/help/AnIndex
usr/lib/R/site-library/TitanCNA/help/TitanCNA.rdb
usr/lib/R/site-library/TitanCNA/help/TitanCNA.rdx
usr/lib/R/site-library/TitanCNA/help/aliases.rds
usr/lib/R/site-library/TitanCNA/help/paths.rds
usr/lib/R/site-library/TitanCNA/html
usr/lib/R/site-library/TitanCNA/html/00Index.html
usr/lib/R/site-library/TitanCNA/html/R.css
usr/lib/R/site-library/TitanCNA/libs
usr/lib/R/site-library/TitanCNA/libs/TitanCNA.so
usr/share
usr/share/doc
usr/share/doc/r-bioc-titancna
usr/share/doc/r-bioc-titancna/changelog.Debian.gz
usr/share/doc/r-bioc-titancna/copyright