atac (0~20150903+r2013-10build1)

Details

Core information at a glance

Distribution
ubuntu
Origin
ubuntu-stonking
Repository
https://ports.ubuntu.com
Codename
stonking
Component
universe
Source
kmer
Architecture
armhf
Section
universe/science
Priority
optional
Maintainer
Ubuntu Developers <[email protected]>

Size & integrity

Byte sizes and integrity verification

Installed size
2.8 kB
Size expected
400.6 kB
Size actual
400.6 kB
Size match

Dependencies

Required package dependencies

  • libc6 (>= 2.38)
  • libgcc-s1 (>= 3.5)
  • libstdc++6 (>= 5.2)
  • python3 (<< 3.15)
  • python3 (>= 3.14~)
  • python3.14
  • python3:any
  • perl:any
  • libfile-which-perl
  • leaff
  • meryl
  • gnuplot

Suggested packages

Recommended additional packages

  • None

Description

genome assembly-to-assembly comparison

Homepage Download .deb

Tags

Package classification tags

None

Checksums

Hash values and integrity verification status

TypeActualMatch
MD5448bf906…7928cd68
SHA-122bdbab9…47e77fec
SHA-256b95d82b0…d13796b8
SHA-512afb719ba…83fb1c11

Contents

Files and directories included

.
usr
usr/bin
usr/bin/atac
usr/lib
usr/lib/atac
usr/lib/atac/bin
usr/lib/atac/bin/AtacDriver.py
usr/lib/atac/bin/cleanAtac
usr/lib/atac/bin/clumpMaker
usr/lib/atac/bin/coalesceMatches
usr/lib/atac/bin/correctGaps
usr/lib/atac/bin/extractSequence
usr/lib/atac/bin/extractUnmapped
usr/lib/atac/bin/gapShifter
usr/lib/atac/bin/happy-clones-span-clumps
usr/lib/atac/bin/heavychains
usr/lib/atac/bin/lengthFilter
usr/lib/atac/bin/makeplot.pl
usr/lib/atac/bin/matchExtender
usr/lib/atac/bin/mismatchCounter
usr/lib/atac/bin/overlap
usr/lib/atac/bin/projectFeatures
usr/lib/atac/bin/seatac
usr/lib/atac/bin/statsGenerator
usr/lib/atac/bin/testAtac
usr/lib/atac/bin/uniqueFilter
usr/lib/atac/lib
usr/lib/atac/lib/AtacDriver.py
usr/lib/atac/lib/AtacFile.py
usr/lib/atac/lib/DNA.py
usr/lib/atac/lib/IdxStore.py
usr/lib/atac/lib/MatchRecord.py
usr/lib/atac/lib/MyFile.py
usr/lib/atac/lib/PerfectRuns.py
usr/lib/atac/lib/TrimMatchOverlaps.py
usr/lib/atac/lib/UniqueFilter.py
usr/lib/atac/lib/dedashMatches.py
usr/lib/atac/lib/fillIntraRunGaps.py
usr/lib/atac/lib/filter-heavychains.so
usr/lib/atac/lib/filter-nop.so
usr/lib/atac/lib/halign.so
usr/lib/atac/lib/localAlignerInterface.so
usr/lib/atac/lib/mkstats.py
usr/lib/atac/lib/squeezeIntraRunGaps.py
usr/share
usr/share/doc
usr/share/doc/atac
usr/share/doc/atac/README.atac
usr/share/doc/atac/README.test
usr/share/doc/atac/atac-unit-test
usr/share/doc/atac/copyright
usr/share/lintian
usr/share/lintian/overrides
usr/share/lintian/overrides/atac
usr/share/man
usr/share/man/man1
usr/share/man/man1/atac.1.gz
usr/share/python3
usr/share/python3/runtime.d
usr/share/python3/runtime.d/atac.rtupdate
usr/share/doc/atac/changelog.Debian.gz