sga (0.10.15-7build2)

5 versions available in ubuntu/stonking/universe/armhf

Details

Core information at a glance

Distribution
ubuntu
Origin
ubuntu-stonking
Repository
https://ports.ubuntu.com
Codename
stonking
Component
universe
Source
none
Architecture
armhf
Section
universe/science
Priority
optional
Maintainer
Ubuntu Developers <[email protected]>

Size & integrity

Byte sizes and integrity verification

Installed size
1.3 kB
Size expected
657 kB
Size actual
657 kB
Size match

Dependencies

Required package dependencies

  • libbamtools2.5.3 (>= 2.5.3+dfsg)
  • libc6 (>= 2.38)
  • libgcc-s1 (>= 3.5)
  • libgomp1 (>= 6)
  • libstdc++6 (>= 14)
  • zlib1g (>= 1:1.2.3.3)
  • python3:any
  • perl:any
  • samtools
  • python3-ruffus
  • python3-pysam

Suggested packages

Recommended additional packages

  • None

Description

de novo genome assembler that uses string graphs

Homepage Download .deb

Tags

Package classification tags

None

Checksums

Hash values and integrity verification status

TypeActualMatch
MD5a900b3a6…7e74eaaa
SHA-1e97bb8b9…c986503a
SHA-2562a686684…feccfb65
SHA-512e25750db…8a955b66

Contents

Files and directories included

.
usr
usr/bin
usr/bin/sga
usr/bin/sga-align
usr/bin/sga-astat
usr/bin/sga-bam2de
usr/bin/sga-mergeDriver
usr/share
usr/share/doc
usr/share/doc/sga
usr/share/doc/sga/README.Debian
usr/share/doc/sga/README.gz
usr/share/doc/sga/README.md
usr/share/doc/sga/changelog.Debian.gz
usr/share/doc/sga/copyright
usr/share/doc/sga/examples
usr/share/doc/sga/examples/sga-celegans.sh
usr/share/doc/sga/index.html
usr/share/man
usr/share/man/man1
usr/share/man/man1/sga-align.1.gz
usr/share/man/man1/sga-astat.1.gz
usr/share/man/man1/sga-bam2de.1.gz
usr/share/man/man1/sga-mergeDriver.1.gz
usr/share/man/man1/sga.1.gz