simkamin (1.5.3-10)
Details
Core information at a glance
- Distribution
- ubuntu
- Origin
- ubuntu-stonking
- Repository
- https://ports.ubuntu.com
- Codename
- stonking
- Component
- universe
- Source
- simka
- Architecture
- armhf
- Section
- universe/science
- Priority
- optional
- Maintainer
- Ubuntu Developers <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 385 B
- Size expected
- 34.6 kB
- Size actual
- 34.6 kB
- Size match
Suggested packages
Recommended additional packages
- None
Description
approximate comparative metagenomics method dedicated to NGS datasets
Tags
Package classification tags
None
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | 32d75021…3ba460c7 | |
| SHA-1 | e19b0c7b…963e1575 | |
| SHA-256 | 13867cc4…5ef7c2d0 | |
| SHA-512 | bf30971d…784f3473 |
Contents
Files and directories included
. usr usr/bin usr/share usr/share/doc usr/share/doc/simkamin usr/share/doc/simkamin/changelog.Debian.gz usr/share/doc/simkamin/copyright usr/share/doc/simkamin/example usr/share/doc/simkamin/example/simkaMin usr/share/doc/simkamin/example/simkaMin/test_simkaMin.py.gz usr/share/doc/simkamin/example/simkaMin/truth_simkaMin usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__0-1000_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__0-1000_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__0-1000_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__0-1000_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__0-1000_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__0-1000_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__0-100_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__0-100_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__0-100_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__0-100_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__0-100_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__0-100_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__100-1000_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__100-1000_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__100-1000_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__100-1000_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__100-1000_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__100-1000_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__100-100_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__100-100_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__100-100_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__100-100_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__100-100_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__100-100_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_0-1000_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_0-1000_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_0-1000_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_0-1000_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_0-1000_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_0-1000_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_0-100_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_0-100_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_0-100_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_0-100_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_0-100_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_0-100_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_100-1000_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_100-1000_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_100-1000_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_100-1000_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_100-1000_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_100-1000_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_100-100_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_100-100_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_100-100_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_100-100_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_100-100_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_100-100_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__0-1000_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__0-1000_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__0-1000_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__0-1000_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__0-1000_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__0-1000_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__0-100_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__0-100_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__0-100_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__0-100_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__0-100_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__0-100_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__100-1000_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__100-1000_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__100-1000_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__100-1000_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__100-1000_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__100-1000_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__100-100_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__100-100_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__100-100_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__100-100_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__100-100_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__100-100_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_0-1000_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_0-1000_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_0-1000_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_0-1000_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_0-1000_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_0-1000_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_0-100_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_0-100_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_0-100_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_0-100_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_0-100_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_0-100_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_100-1000_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_100-1000_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_100-1000_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_100-1000_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_100-1000_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_100-1000_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_100-100_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_100-100_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_100-100_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_100-100_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_100-100_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_100-100_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__0-100 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__0-100/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__0-100/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__0-1000 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__0-1000/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__0-1000/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__0-1000_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__0-1000_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__0-1000_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__0-1000_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__0-1000_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__0-1000_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__0-100_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__0-100_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__0-100_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__0-100_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__0-100_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__0-100_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__100-100 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__100-100/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__100-100/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__100-1000 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__100-1000/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__100-1000/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__100-1000_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__100-1000_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__100-1000_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__100-1000_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__100-1000_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__100-1000_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__100-100_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__100-100_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__100-100_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__100-100_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__100-100_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__100-100_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_0-100 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_0-100/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_0-100/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_0-1000 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_0-1000/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_0-1000/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_0-1000_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_0-1000_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_0-1000_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_0-1000_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_0-1000_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_0-1000_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_0-100_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_0-100_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_0-100_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_0-100_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_0-100_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_0-100_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_100-1000_n0 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