gasic (0.0.r19-8build1)

Details

Core information at a glance

Distribution
ubuntu
Origin
ubuntu-stonking
Repository
https://nl.archive.ubuntu.com/ubuntu
Codename
stonking
Component
universe
Source
none
Architecture
i386
Section
universe/science
Priority
optional
Maintainer
Ubuntu Developers <[email protected]>

Size & integrity

Byte sizes and integrity verification

Installed size
80 B
Size expected
21.2 kB
Size actual
21.2 kB
Size match

Dependencies

Required package dependencies

  • python3:any
  • python3-scipy
  • python3-numpy
  • python3-biopython
  • python3-pysam
  • python3-matplotlib
  • bowtie
  • bowtie2
  • bwa
  • seqan-apps

Suggested packages

Recommended additional packages

  • gasic-examples

Description

genome abundance similarity correction

Tags

Package classification tags

None

Checksums

Hash values and integrity verification status

TypeActualMatch
MD584ffabfe…e332e57b
SHA-163961b4d…f4955b19
SHA-256eb1bc8dc…e1398ab1
SHA-512d4c6abe1…52b04031

Contents

Files and directories included

.
usr
usr/bin
usr/share
usr/share/doc
usr/share/doc/gasic
usr/share/doc/gasic/MANUAL.gz
usr/share/doc/gasic/README.Debian
usr/share/doc/gasic/README.gz
usr/share/doc/gasic/README.test
usr/share/doc/gasic/changelog.Debian.gz
usr/share/doc/gasic/copyright
usr/share/doc/gasic/examples
usr/share/doc/gasic/examples/README.example
usr/share/doc/gasic/examples/example_script.py
usr/share/gasic
usr/share/gasic/core
usr/share/gasic/core/__init__.py
usr/share/gasic/core/gasic.py
usr/share/gasic/core/tools.py
usr/share/gasic/correct_abundances.py
usr/share/gasic/create_matrix.py
usr/share/gasic/quality_check.py
usr/share/gasic/run_mappers.py
usr/share/man
usr/share/man/man1
usr/share/man/man1/correct_abundances.1.gz
usr/share/man/man1/create_matrix.1.gz
usr/share/man/man1/quality_check.1.gz
usr/share/man/man1/run_mappers.1.gz
usr/share/python3
usr/share/python3/runtime.d
usr/share/python3/runtime.d/gasic.rtupdate
usr/bin/correct_abundances
usr/bin/create_matrix
usr/bin/quality_check
usr/bin/run_mappers