jaligner (1.0+dfsg-11build1)

Details

Core information at a glance

Distribution: ubuntu
Origin: ubuntu-stonking
Repository: https://nl.archive.ubuntu.com/ubuntu
Codename: stonking
Component: universe
Source: none
Architecture: i386
Section: universe/science
Priority: optional
Maintainer: Ubuntu Developers <[email protected]>

Size & integrity

Byte sizes and integrity verification

Installed size: 442 B
Size expected: 138.1 kB
Size actual: 138.1 kB
Size match

Dependencies

Required package dependencies

default-jre-headless

Suggested packages

Recommended additional packages

default-jre

Description

Smith-Waterman algorithm with Gotoh's improvement

Homepage Download .deb

Checksums

Hash values and integrity verification status

Type	Expected	Actual
MD5	ed14decf…2003f7b1	ed14decf…2003f7b1
SHA-1	2c1f800f…8f427d95	2c1f800f…8f427d95
SHA-256	ce0bb9d2…2ce85287	ce0bb9d2…2ce85287
SHA-512	4cb6db3e…427cf932	4cb6db3e…427cf932

Files and directories included

.
usr
usr/bin
usr/bin/jaligner
usr/share
usr/share/doc
usr/share/doc/jaligner
usr/share/doc/jaligner/README
usr/share/doc/jaligner/README.md
usr/share/doc/jaligner/README.test
usr/share/doc/jaligner/README.test_data
usr/share/doc/jaligner/changelog.Debian.gz
usr/share/doc/jaligner/copyright
usr/share/doc/jaligner/examples
usr/share/doc/jaligner/examples/p53_human.fasta
usr/share/doc/jaligner/examples/p53_mouse.fasta
usr/share/doc/jaligner/examples/references.tar.xz
usr/share/doc/jaligner/run-unit-test
usr/share/jaligner
usr/share/jaligner/jaligner
usr/share/jaligner/jaligner/example
usr/share/jaligner/jaligner/example/sequences
usr/share/jaligner/jaligner/example/sequences/p53_human.fasta
usr/share/jaligner/jaligner/example/sequences/p53_mouse.fasta
usr/share/jaligner/jaligner/matrix
usr/share/jaligner/jaligner/matrix/matrices
usr/share/jaligner/jaligner/matrix/matrices/BLOSUM100
usr/share/jaligner/jaligner/matrix/matrices/BLOSUM30
usr/share/jaligner/jaligner/matrix/matrices/BLOSUM35
usr/share/jaligner/jaligner/matrix/matrices/BLOSUM40
usr/share/jaligner/jaligner/matrix/matrices/BLOSUM45
usr/share/jaligner/jaligner/matrix/matrices/BLOSUM50
usr/share/jaligner/jaligner/matrix/matrices/BLOSUM55
usr/share/jaligner/jaligner/matrix/matrices/BLOSUM60
usr/share/jaligner/jaligner/matrix/matrices/BLOSUM62
usr/share/jaligner/jaligner/matrix/matrices/BLOSUM65
usr/share/jaligner/jaligner/matrix/matrices/BLOSUM70
usr/share/jaligner/jaligner/matrix/matrices/BLOSUM75
usr/share/jaligner/jaligner/matrix/matrices/BLOSUM80
usr/share/jaligner/jaligner/matrix/matrices/BLOSUM85
usr/share/jaligner/jaligner/matrix/matrices/BLOSUM90
usr/share/jaligner/jaligner/matrix/matrices/BLOSUMN
usr/share/jaligner/jaligner/matrix/matrices/DAYHOFF
usr/share/jaligner/jaligner/matrix/matrices/EDNAFULL
usr/share/jaligner/jaligner/matrix/matrices/GONNET
usr/share/jaligner/jaligner/matrix/matrices/IDENTITY
usr/share/jaligner/jaligner/matrix/matrices/MATCH
usr/share/jaligner/jaligner/matrix/matrices/PAM10
usr/share/jaligner/jaligner/matrix/matrices/PAM100
usr/share/jaligner/jaligner/matrix/matrices/PAM110
usr/share/jaligner/jaligner/matrix/matrices/PAM120
usr/share/jaligner/jaligner/matrix/matrices/PAM130
usr/share/jaligner/jaligner/matrix/matrices/PAM140
usr/share/jaligner/jaligner/matrix/matrices/PAM150
usr/share/jaligner/jaligner/matrix/matrices/PAM160
usr/share/jaligner/jaligner/matrix/matrices/PAM170
usr/share/jaligner/jaligner/matrix/matrices/PAM180
usr/share/jaligner/jaligner/matrix/matrices/PAM190
usr/share/jaligner/jaligner/matrix/matrices/PAM20
usr/share/jaligner/jaligner/matrix/matrices/PAM200
usr/share/jaligner/jaligner/matrix/matrices/PAM210
usr/share/jaligner/jaligner/matrix/matrices/PAM220
usr/share/jaligner/jaligner/matrix/matrices/PAM230
usr/share/jaligner/jaligner/matrix/matrices/PAM240
usr/share/jaligner/jaligner/matrix/matrices/PAM250
usr/share/jaligner/jaligner/matrix/matrices/PAM260
usr/share/jaligner/jaligner/matrix/matrices/PAM270
usr/share/jaligner/jaligner/matrix/matrices/PAM280
usr/share/jaligner/jaligner/matrix/matrices/PAM290
usr/share/jaligner/jaligner/matrix/matrices/PAM30
usr/share/jaligner/jaligner/matrix/matrices/PAM300
usr/share/jaligner/jaligner/matrix/matrices/PAM310
usr/share/jaligner/jaligner/matrix/matrices/PAM320
usr/share/jaligner/jaligner/matrix/matrices/PAM330
usr/share/jaligner/jaligner/matrix/matrices/PAM340
usr/share/jaligner/jaligner/matrix/matrices/PAM350
usr/share/jaligner/jaligner/matrix/matrices/PAM360
usr/share/jaligner/jaligner/matrix/matrices/PAM370
usr/share/jaligner/jaligner/matrix/matrices/PAM380
usr/share/jaligner/jaligner/matrix/matrices/PAM390
usr/share/jaligner/jaligner/matrix/matrices/PAM40
usr/share/jaligner/jaligner/matrix/matrices/PAM400
usr/share/jaligner/jaligner/matrix/matrices/PAM410
usr/share/jaligner/jaligner/matrix/matrices/PAM420
usr/share/jaligner/jaligner/matrix/matrices/PAM430
usr/share/jaligner/jaligner/matrix/matrices/PAM440
usr/share/jaligner/jaligner/matrix/matrices/PAM450
usr/share/jaligner/jaligner/matrix/matrices/PAM460
usr/share/jaligner/jaligner/matrix/matrices/PAM470
usr/share/jaligner/jaligner/matrix/matrices/PAM480
usr/share/jaligner/jaligner/matrix/matrices/PAM490
usr/share/jaligner/jaligner/matrix/matrices/PAM50
usr/share/jaligner/jaligner/matrix/matrices/PAM500
usr/share/jaligner/jaligner/matrix/matrices/PAM60
usr/share/jaligner/jaligner/matrix/matrices/PAM70
usr/share/jaligner/jaligner/matrix/matrices/PAM80
usr/share/jaligner/jaligner/matrix/matrices/PAM90
usr/share/jaligner/jaligner/ui
usr/share/jaligner/jaligner/ui/AlignWindow.form
usr/share/jaligner/jaligner/ui/images
usr/share/jaligner/jaligner/ui/images/gifs
usr/share/jaligner/jaligner/ui/images/gifs/about.gif
usr/share/jaligner/jaligner/ui/images/gifs/close.gif
usr/share/jaligner/jaligner/ui/images/gifs/copy.gif
usr/share/jaligner/jaligner/ui/images/gifs/cut.gif
usr/share/jaligner/jaligner/ui/images/gifs/delete.gif
usr/share/jaligner/jaligner/ui/images/gifs/jaligner.gif
usr/share/jaligner/jaligner/ui/images/gifs/open.gif
usr/share/jaligner/jaligner/ui/images/gifs/paste.gif
usr/share/jaligner/jaligner/ui/images/gifs/print.gif
usr/share/jaligner/jaligner/ui/images/gifs/save.gif
usr/share/java
usr/share/java/jaligner-1.0.jar
usr/share/man
usr/share/man/man1
usr/share/man/man1/jaligner.1.gz
usr/share/maven-repo
usr/share/maven-repo/jaligner
usr/share/maven-repo/jaligner/jaligner
usr/share/maven-repo/jaligner/jaligner/1.0
usr/share/maven-repo/jaligner/jaligner/1.0/jaligner-1.0.pom
usr/share/maven-repo/jaligner/jaligner/debian
usr/share/maven-repo/jaligner/jaligner/debian/jaligner-debian.pom
usr/share/java/jaligner.jar
usr/share/maven-repo/jaligner/jaligner/1.0/jaligner-1.0.jar
usr/share/maven-repo/jaligner/jaligner/debian/jaligner-debian.jar