mcaller (1.0.3+git20210624.b415090-4)

2 versions available in ubuntu/stonking/universe/riscv64

Version

Details

Core information at a glance

Distribution: ubuntu
Origin: ubuntu-stonking
Repository: https://ports.ubuntu.com
Codename: stonking
Component: universe
Source: none
Architecture: riscv64
Section: universe/science
Priority: optional
Maintainer: Ubuntu Developers <[email protected]>

Size & integrity

Byte sizes and integrity verification

Installed size: 83 B
Size expected: 19.7 kB
Size actual: 19.7 kB
Size match

Dependencies

Required package dependencies

python3
python3-sklearn
python3-h5py
python3-biopython
python3-matplotlib
python3-seaborn
python3-numpy
python3-pysam
python3-scipy
python3-pandas

Suggested packages

Recommended additional packages

graphmap
bwa

Description

find methylation in nanopore reads

Homepage Download .deb

Checksums

Hash values and integrity verification status

Type	Expected	Actual
MD5	Not provided	28fe4e45…aa010c6e
SHA-1	Not provided	699b84db…0a66085d
SHA-256	Not provided	a3b30c2f…703bd3ee
SHA-512	83dc289e…f2c9285f	83dc289e…f2c9285f

Files and directories included

.
usr
usr/bin
usr/lib
usr/lib/debian-med
usr/lib/debian-med/bin
usr/share
usr/share/doc
usr/share/doc/mcaller
usr/share/doc/mcaller/changelog.Debian.gz
usr/share/doc/mcaller/copyright
usr/share/lintian
usr/share/lintian/overrides
usr/share/lintian/overrides/mcaller
usr/share/mCaller
usr/share/mCaller/compare_genomes.py
usr/share/mCaller/extract_contexts.py
usr/share/mCaller/load_mCaller_data.py
usr/share/mCaller/mCaller.py
usr/share/mCaller/make_bed.py
usr/share/mCaller/plotlib.py
usr/share/mCaller/read_qual.py
usr/share/mCaller/train_model.py
usr/share/man
usr/share/man/man1
usr/share/man/man1/compare_genomes.1.gz
usr/share/man/man1/mCaller.1.gz
usr/share/man/man1/make_bed.1.gz
usr/bin/compare_genomes
usr/bin/mCaller
usr/bin/make_bed
usr/lib/debian-med/bin/compare_genomes.py
usr/lib/debian-med/bin/mCaller.py
usr/lib/debian-med/bin/make_bed.py