tombo (1.5.1-8build1)
Details
Core information at a glance
- Distribution
- ubuntu
- Origin
- ubuntu-stonking
- Repository
- https://ports.ubuntu.com
- Codename
- stonking
- Component
- universe
- Source
- none
- Architecture
- riscv64
- Section
- universe/science
- Priority
- optional
- Maintainer
- Ubuntu Developers <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 1.4 kB
- Size expected
- 458.8 kB
- Size actual
- 458.8 kB
- Size match
Dependencies
Required package dependencies
Suggested packages
Recommended additional packages
- None
Description
identification of modified nucleotides from raw nanopore sequencing data
Tags
Package classification tags
None
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | 146466d5…5c8d374d | |
| SHA-1 | 412ac06e…095889ff | |
| SHA-256 | 0cdf1f13…93710069 | |
| SHA-512 | 135e4e8f…3e5bc95f |
Contents
Files and directories included
. usr usr/bin usr/bin/tombo usr/lib usr/lib/python3 usr/lib/python3/dist-packages usr/lib/python3/dist-packages/ont_tombo-1.5.1.egg-info usr/lib/python3/dist-packages/ont_tombo-1.5.1.egg-info/PKG-INFO usr/lib/python3/dist-packages/ont_tombo-1.5.1.egg-info/dependency_links.txt usr/lib/python3/dist-packages/ont_tombo-1.5.1.egg-info/entry_points.txt usr/lib/python3/dist-packages/ont_tombo-1.5.1.egg-info/requires.txt usr/lib/python3/dist-packages/ont_tombo-1.5.1.egg-info/top_level.txt usr/lib/python3/dist-packages/tombo usr/lib/python3/dist-packages/tombo/R_scripts usr/lib/python3/dist-packages/tombo/R_scripts/debugDP.R usr/lib/python3/dist-packages/tombo/R_scripts/debugFit.R usr/lib/python3/dist-packages/tombo/R_scripts/debugRawDP.R usr/lib/python3/dist-packages/tombo/R_scripts/plotGroupComp.R usr/lib/python3/dist-packages/tombo/R_scripts/plotKmerDist.R usr/lib/python3/dist-packages/tombo/R_scripts/plotModelComp.R usr/lib/python3/dist-packages/tombo/R_scripts/plotMotifStats.R usr/lib/python3/dist-packages/tombo/R_scripts/plotMultiReadCorr.R usr/lib/python3/dist-packages/tombo/R_scripts/plotPerReadStats.R usr/lib/python3/dist-packages/tombo/R_scripts/plotROC.R usr/lib/python3/dist-packages/tombo/R_scripts/plotROCPerRead.R usr/lib/python3/dist-packages/tombo/R_scripts/plotReadCorr.R usr/lib/python3/dist-packages/tombo/R_scripts/plotSigMDS.R usr/lib/python3/dist-packages/tombo/R_scripts/plotSingleRead.R usr/lib/python3/dist-packages/tombo/R_scripts/plotSingleRun.R usr/lib/python3/dist-packages/tombo/__init__.py usr/lib/python3/dist-packages/tombo/__main__.py usr/lib/python3/dist-packages/tombo/_c_dynamic_programming.cpython-314-riscv64-linux-gnu.so usr/lib/python3/dist-packages/tombo/_c_dynamic_programming.pyx usr/lib/python3/dist-packages/tombo/_c_helper.cpython-314-riscv64-linux-gnu.so usr/lib/python3/dist-packages/tombo/_c_helper.pyx usr/lib/python3/dist-packages/tombo/_default_parameters.py usr/lib/python3/dist-packages/tombo/_event_resquiggle.py usr/lib/python3/dist-packages/tombo/_filter_reads.py usr/lib/python3/dist-packages/tombo/_option_parsers.py usr/lib/python3/dist-packages/tombo/_plot_commands.py usr/lib/python3/dist-packages/tombo/_preprocess.py usr/lib/python3/dist-packages/tombo/_text_output_commands.py usr/lib/python3/dist-packages/tombo/_version.py usr/lib/python3/dist-packages/tombo/resquiggle.py usr/lib/python3/dist-packages/tombo/tombo_helper.py usr/lib/python3/dist-packages/tombo/tombo_models usr/lib/python3/dist-packages/tombo/tombo_models/tombo.DNA.5mC.model usr/lib/python3/dist-packages/tombo/tombo_models/tombo.DNA.6mA.model usr/lib/python3/dist-packages/tombo/tombo_models/tombo.DNA.CpG.model usr/lib/python3/dist-packages/tombo/tombo_models/tombo.DNA.dam.model usr/lib/python3/dist-packages/tombo/tombo_models/tombo.DNA.dcm.model usr/lib/python3/dist-packages/tombo/tombo_models/tombo.DNA.model usr/lib/python3/dist-packages/tombo/tombo_models/tombo.RNA.180mV.model usr/lib/python3/dist-packages/tombo/tombo_models/tombo.RNA.200mV.model usr/lib/python3/dist-packages/tombo/tombo_models/tombo.RNA.5mC.model usr/lib/python3/dist-packages/tombo/tombo_stats.py usr/share usr/share/doc usr/share/doc/tombo usr/share/doc/tombo/changelog.Debian.gz usr/share/doc/tombo/copyright usr/share/man usr/share/man/man1 usr/share/man/man1/tombo.1.gz usr/share/python3 usr/share/python3/runtime.d usr/share/python3/runtime.d/tombo.rtupdate usr/share/tombo usr/share/tombo/scripts usr/share/tombo/scripts/debug_bandwidth.R usr/share/tombo/scripts/debug_est_alt.R usr/share/tombo/scripts/debug_params.R usr/share/tombo/scripts/dump_per_read_statistics.py usr/share/tombo/scripts/outlier_robust_llr.R usr/share/tombo/scripts/plot_correction.py usr/share/tombo/scripts/plot_multi_correction.py usr/share/tombo/scripts/plot_single_read.py usr/share/tombo/scripts/test_beta_priors.R