r-bioc-genomicfeatures (1.58.0+dfsg-2)
Details
Core information at a glance
- Distribution
- ubuntu
- Origin
- ubuntu-plucky
- Repository
- https://nl.archive.ubuntu.com/ubuntu
- Codename
- plucky
- Component
- universe
- Source
- r-bioc-genomicfeatures
- Architecture
- amd64
- Section
- universe/gnu-r
- Priority
- optional
- Maintainer
- Ubuntu Developers <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 1.5 MB
- Size expected
- 937.2 kB
- Size actual
- 937.2 kB
- Size match
- match
Dependencies
Required package dependencies
- r-api-4.0
- r-api-bioc-3.20
- r-bioc-biocgenerics (>= 0.51.2)
- r-bioc-s4vectors (>= 0.17.29)
- r-bioc-iranges (>= 2.37.1)
- r-bioc-genomeinfodb (>= 1.35.8)
- r-bioc-genomicranges (>= 1.55.2)
- r-bioc-annotationdbi (>= 1.41.4)
- r-cran-dbi
- r-bioc-xvector
- r-bioc-biostrings
- r-bioc-rtracklayer
Recommends
Recommended package dependencies
- None
Suggested packages
Recommended additional packages
Provides
Virtual packages provided
- None
Description
GNU R tools for making and manipulating transcript centric annotations
Tags
Package classification tags
None
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | deb1aef5…e7710389 | match |
| SHA-1 | 9f324c52…898fe98a | match |
| SHA-256 | 0baa3a4c…629fd1b6 | match |
| SHA-512 | 93d29984…2460493e | match |
Contents
Files and directories included
. usr usr/lib usr/lib/R usr/lib/R/site-library usr/lib/R/site-library/GenomicFeatures usr/lib/R/site-library/GenomicFeatures/CITATION usr/lib/R/site-library/GenomicFeatures/DESCRIPTION usr/lib/R/site-library/GenomicFeatures/INDEX usr/lib/R/site-library/GenomicFeatures/Meta usr/lib/R/site-library/GenomicFeatures/Meta/Rd.rds usr/lib/R/site-library/GenomicFeatures/Meta/features.rds usr/lib/R/site-library/GenomicFeatures/Meta/hsearch.rds usr/lib/R/site-library/GenomicFeatures/Meta/links.rds usr/lib/R/site-library/GenomicFeatures/Meta/nsInfo.rds usr/lib/R/site-library/GenomicFeatures/Meta/package.rds usr/lib/R/site-library/GenomicFeatures/Meta/vignette.rds usr/lib/R/site-library/GenomicFeatures/NAMESPACE usr/lib/R/site-library/GenomicFeatures/NEWS usr/lib/R/site-library/GenomicFeatures/R usr/lib/R/site-library/GenomicFeatures/R/GenomicFeatures usr/lib/R/site-library/GenomicFeatures/R/GenomicFeatures.rdb usr/lib/R/site-library/GenomicFeatures/R/GenomicFeatures.rdx usr/lib/R/site-library/GenomicFeatures/doc usr/lib/R/site-library/GenomicFeatures/doc/GenomicFeatures.R usr/lib/R/site-library/GenomicFeatures/doc/GenomicFeatures.Rmd usr/lib/R/site-library/GenomicFeatures/doc/GenomicFeatures.html usr/lib/R/site-library/GenomicFeatures/doc/GenomicFeatures.md usr/lib/R/site-library/GenomicFeatures/doc/index.html usr/lib/R/site-library/GenomicFeatures/extdata usr/lib/R/site-library/GenomicFeatures/extdata/Biomart_Ensembl_sample.sqlite usr/lib/R/site-library/GenomicFeatures/extdata/FeatureDb.sqlite usr/lib/R/site-library/GenomicFeatures/extdata/ITAG4.1_gene_models.subset.gff usr/lib/R/site-library/GenomicFeatures/extdata/hg19_knownGene_sample.sqlite usr/lib/R/site-library/GenomicFeatures/extdata/sample_ranges.rds usr/lib/R/site-library/GenomicFeatures/help usr/lib/R/site-library/GenomicFeatures/help/AnIndex usr/lib/R/site-library/GenomicFeatures/help/GenomicFeatures.rdb usr/lib/R/site-library/GenomicFeatures/help/GenomicFeatures.rdx usr/lib/R/site-library/GenomicFeatures/help/aliases.rds usr/lib/R/site-library/GenomicFeatures/help/paths.rds usr/lib/R/site-library/GenomicFeatures/html usr/lib/R/site-library/GenomicFeatures/html/00Index.html usr/lib/R/site-library/GenomicFeatures/html/R.css usr/lib/R/site-library/GenomicFeatures/script usr/lib/R/site-library/GenomicFeatures/script/README usr/lib/R/site-library/GenomicFeatures/unitTests usr/lib/R/site-library/GenomicFeatures/unitTests/test_TxDb_seqinfo.R usr/lib/R/site-library/GenomicFeatures/unitTests/test_coordinate-mapping-methods.R usr/lib/R/site-library/GenomicFeatures/unitTests/test_exonicParts.R usr/lib/R/site-library/GenomicFeatures/unitTests/test_getPromoterSeq-methods.R usr/lib/R/site-library/GenomicFeatures/unitTests/test_makeIdsForUniqueDataFrameRows.R usr/lib/R/site-library/GenomicFeatures/unitTests/test_mapIdsToRanges.R usr/lib/R/site-library/GenomicFeatures/unitTests/test_nearest-methods.R usr/lib/R/site-library/GenomicFeatures/unitTests/test_select-methods.R usr/lib/R/site-library/GenomicFeatures/unitTests/test_transcriptLengths.R usr/lib/R/site-library/GenomicFeatures/unitTests/test_transcripts.R usr/lib/R/site-library/GenomicFeatures/unitTests/test_transcriptsBy.R usr/lib/R/site-library/GenomicFeatures/unitTests/test_transcriptsByOverlaps.R usr/share usr/share/doc usr/share/doc/r-bioc-genomicfeatures usr/share/doc/r-bioc-genomicfeatures/changelog.Debian.gz usr/share/doc/r-bioc-genomicfeatures/copyright