r-bioc-ensembldb (2.30.0+dfsg-3)
2 versions available in ubuntu/questing/universe/riscv64
Details
Core information at a glance
- Distribution
- ubuntu
- Origin
- ubuntu-questing
- Repository
- https://nl.archive.ubuntu.com/ubuntu
- Codename
- questing
- Component
- universe
- Source
- r-bioc-ensembldb
- Architecture
- riscv64
- Section
- universe/gnu-r
- Priority
- optional
- Maintainer
- Ubuntu Developers <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 2.4 MB
- Size expected
- 1.5 MB
- Size actual
- 1.5 MB
- Size match
- match
Dependencies
Required package dependencies
- r-api-4.0
- r-api-bioc-3.20
- r-bioc-biocgenerics (>= 0.15.10)
- r-bioc-genomicranges (>= 1.31.18)
- r-bioc-genomicfeatures (>= 1.49.6)
- r-bioc-annotationfilter (>= 1.5.2)
- r-cran-rsqlite (>= 1.1)
- r-cran-dbi
- r-bioc-biobase
- r-bioc-genomeinfodb
- r-bioc-annotationdbi (>= 1.31.19)
- r-bioc-rtracklayer
- r-bioc-s4vectors (>= 0.23.10)
- r-bioc-rsamtools
- r-bioc-iranges (>= 2.13.24)
- r-bioc-protgenerics
- r-bioc-biostrings (>= 2.47.9)
- r-cran-curl
Recommends
Recommended package dependencies
- None
Suggested packages
Recommended additional packages
Provides
Virtual packages provided
- None
Description
GNU R utilities to create and use an Ensembl based annotation database
Tags
Package classification tags
None
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | 2998c4a5…0a80595a | match |
| SHA-1 | 1879dea1…485d1b4f | match |
| SHA-256 | 0c105f76…2838ed90 | match |
| SHA-512 | 729c8494…a2cb8508 | match |
Contents
Files and directories included
. usr usr/lib usr/lib/R usr/lib/R/site-library usr/lib/R/site-library/ensembldb usr/lib/R/site-library/ensembldb/CITATION usr/lib/R/site-library/ensembldb/DESCRIPTION usr/lib/R/site-library/ensembldb/INDEX usr/lib/R/site-library/ensembldb/Meta usr/lib/R/site-library/ensembldb/Meta/Rd.rds usr/lib/R/site-library/ensembldb/Meta/features.rds usr/lib/R/site-library/ensembldb/Meta/hsearch.rds usr/lib/R/site-library/ensembldb/Meta/links.rds usr/lib/R/site-library/ensembldb/Meta/nsInfo.rds usr/lib/R/site-library/ensembldb/Meta/package.rds usr/lib/R/site-library/ensembldb/Meta/vignette.rds usr/lib/R/site-library/ensembldb/NAMESPACE usr/lib/R/site-library/ensembldb/NEWS usr/lib/R/site-library/ensembldb/R usr/lib/R/site-library/ensembldb/R/ensembldb usr/lib/R/site-library/ensembldb/R/ensembldb.rdb usr/lib/R/site-library/ensembldb/R/ensembldb.rdx usr/lib/R/site-library/ensembldb/YGRanges.RData usr/lib/R/site-library/ensembldb/chrY usr/lib/R/site-library/ensembldb/chrY/ens_chromosome.txt usr/lib/R/site-library/ensembldb/chrY/ens_exon.txt usr/lib/R/site-library/ensembldb/chrY/ens_gene.txt usr/lib/R/site-library/ensembldb/chrY/ens_metadata.txt usr/lib/R/site-library/ensembldb/chrY/ens_tx.txt usr/lib/R/site-library/ensembldb/chrY/ens_tx2exon.txt usr/lib/R/site-library/ensembldb/doc usr/lib/R/site-library/ensembldb/doc/MySQL-backend.R usr/lib/R/site-library/ensembldb/doc/MySQL-backend.Rmd usr/lib/R/site-library/ensembldb/doc/coordinate-mapping-use-cases.R usr/lib/R/site-library/ensembldb/doc/coordinate-mapping-use-cases.Rmd usr/lib/R/site-library/ensembldb/doc/coordinate-mapping.R usr/lib/R/site-library/ensembldb/doc/coordinate-mapping.Rmd usr/lib/R/site-library/ensembldb/doc/ensembldb.R usr/lib/R/site-library/ensembldb/doc/ensembldb.Rmd usr/lib/R/site-library/ensembldb/doc/index.html usr/lib/R/site-library/ensembldb/doc/proteins.R usr/lib/R/site-library/ensembldb/doc/proteins.Rmd usr/lib/R/site-library/ensembldb/extended_tests usr/lib/R/site-library/ensembldb/extended_tests/extended_tests.R usr/lib/R/site-library/ensembldb/extended_tests/performance_tests.R usr/lib/R/site-library/ensembldb/gff usr/lib/R/site-library/ensembldb/gff/Devosia_geojensis.ASM96941v1.32.gff3.gz usr/lib/R/site-library/ensembldb/gtf usr/lib/R/site-library/ensembldb/gtf/Devosia_geojensis.ASM96941v1.32.gtf.gz usr/lib/R/site-library/ensembldb/help usr/lib/R/site-library/ensembldb/help/AnIndex usr/lib/R/site-library/ensembldb/help/aliases.rds usr/lib/R/site-library/ensembldb/help/ensembldb.rdb usr/lib/R/site-library/ensembldb/help/ensembldb.rdx usr/lib/R/site-library/ensembldb/help/paths.rds usr/lib/R/site-library/ensembldb/html usr/lib/R/site-library/ensembldb/html/00Index.html usr/lib/R/site-library/ensembldb/html/R.css usr/lib/R/site-library/ensembldb/perl usr/lib/R/site-library/ensembldb/perl/get_gene_transcript_exon_tables.pl usr/lib/R/site-library/ensembldb/perl/test_script.pl usr/lib/R/site-library/ensembldb/pkg-template usr/lib/R/site-library/ensembldb/pkg-template/DESCRIPTION usr/lib/R/site-library/ensembldb/pkg-template/NAMESPACE usr/lib/R/site-library/ensembldb/pkg-template/R usr/lib/R/site-library/ensembldb/pkg-template/R/zzz.R usr/lib/R/site-library/ensembldb/pkg-template/man usr/lib/R/site-library/ensembldb/pkg-template/man/package.Rd usr/lib/R/site-library/ensembldb/scripts usr/lib/R/site-library/ensembldb/scripts/checkEnsDbs.R usr/lib/R/site-library/ensembldb/scripts/evaluate_gc_content.Rmd usr/lib/R/site-library/ensembldb/scripts/generate-EnsDBs.R usr/lib/R/site-library/ensembldb/shinyHappyPeople usr/lib/R/site-library/ensembldb/shinyHappyPeople/server.R usr/lib/R/site-library/ensembldb/shinyHappyPeople/ui.R usr/lib/R/site-library/ensembldb/txt usr/lib/R/site-library/ensembldb/txt/ENST00000200135.fa.gz usr/lib/R/site-library/ensembldb/txt/ENST00000335953.fa.gz usr/share usr/share/doc usr/share/doc/r-bioc-ensembldb usr/share/doc/r-bioc-ensembldb/changelog.Debian.gz usr/share/doc/r-bioc-ensembldb/copyright
Versions
2 versions in this repository slot, newest first