unicycler (0.5.1+dfsg-3)
Details
Core information at a glance
- Distribution
- ubuntu
- Origin
- ubuntu-resolute
- Repository
- https://nl.archive.ubuntu.com/ubuntu
- Codename
- resolute
- Component
- universe
- Source
- unicycler
- Architecture
- amd64
- Section
- universe/science
- Priority
- optional
- Maintainer
- Ubuntu Developers <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 3.1 MB
- Size expected
- 910.3 kB
- Size actual
- 910.3 kB
- Size match
- match
Dependencies
Required package dependencies
- python3 (>= 3~)
- python3:any
- libc6 (>= 2.38)
- libgcc-s1 (>= 3.3.1)
- libstdc++6 (>= 14)
- zlib1g (>= 1:1.1.4)
- default-jre
- bcftools
- bowtie2
- miniasm
- ncbi-blast+
- pilon
- racon
- samtools
- spades (>= 3.14)
Recommends
Recommended package dependencies
Suggested packages
Recommended additional packages
- None
Provides
Virtual packages provided
- None
Description
hybrid assembly pipeline for bacterial genomes
Tags
Package classification tags
None
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | 59d116cb…0a76a9a5 | match |
| SHA-1 | e0ff4481…f779bac1 | match |
| SHA-256 | 2828a694…286a5a43 | match |
| SHA-512 | 458c1afb…5f905a62 | match |
Contents
Files and directories included
. usr usr/bin usr/bin/unicycler usr/lib usr/lib/python3 usr/lib/python3/dist-packages usr/lib/python3/dist-packages/unicycler usr/lib/python3/dist-packages/unicycler/__init__.py usr/lib/python3/dist-packages/unicycler/alignment.py usr/lib/python3/dist-packages/unicycler/assembly_graph.py usr/lib/python3/dist-packages/unicycler/assembly_graph_copy_depth.py usr/lib/python3/dist-packages/unicycler/assembly_graph_segment.py usr/lib/python3/dist-packages/unicycler/blast_func.py usr/lib/python3/dist-packages/unicycler/bridge_common.py usr/lib/python3/dist-packages/unicycler/bridge_long_read.py usr/lib/python3/dist-packages/unicycler/bridge_long_read_simple.py usr/lib/python3/dist-packages/unicycler/bridge_loop_unroll.py usr/lib/python3/dist-packages/unicycler/bridge_miniasm.py usr/lib/python3/dist-packages/unicycler/bridge_spades_contig.py usr/lib/python3/dist-packages/unicycler/cpp_functions.so usr/lib/python3/dist-packages/unicycler/cpp_wrappers.py usr/lib/python3/dist-packages/unicycler/gene_data usr/lib/python3/dist-packages/unicycler/gene_data/lambda_phage.fasta usr/lib/python3/dist-packages/unicycler/gene_data/start_genes.fasta usr/lib/python3/dist-packages/unicycler/log.py usr/lib/python3/dist-packages/unicycler/miniasm_assembly.py usr/lib/python3/dist-packages/unicycler/minimap_alignment.py usr/lib/python3/dist-packages/unicycler/misc.py usr/lib/python3/dist-packages/unicycler/path_finding.py usr/lib/python3/dist-packages/unicycler/read_ref.py usr/lib/python3/dist-packages/unicycler/settings.py usr/lib/python3/dist-packages/unicycler/spades_func.py usr/lib/python3/dist-packages/unicycler/string_graph.py usr/lib/python3/dist-packages/unicycler/unicycler.py usr/lib/python3/dist-packages/unicycler/unicycler_align.py usr/lib/python3/dist-packages/unicycler/version.py usr/lib/python3/dist-packages/unicycler-0.5.1.egg-info usr/lib/python3/dist-packages/unicycler-0.5.1.egg-info/PKG-INFO usr/lib/python3/dist-packages/unicycler-0.5.1.egg-info/dependency_links.txt usr/lib/python3/dist-packages/unicycler-0.5.1.egg-info/entry_points.txt usr/lib/python3/dist-packages/unicycler-0.5.1.egg-info/not-zip-safe usr/lib/python3/dist-packages/unicycler-0.5.1.egg-info/top_level.txt usr/share usr/share/doc usr/share/doc/unicycler usr/share/doc/unicycler/README.test usr/share/doc/unicycler/changelog.Debian.gz usr/share/doc/unicycler/copyright usr/share/doc/unicycler/run-unit-test usr/share/man usr/share/man/man1 usr/share/man/man1/unicycler.1.gz usr/share/man/man1/unicycler_align.1.gz usr/share/man/man1/unicycler_check.1.gz usr/share/man/man1/unicycler_polish.1.gz usr/share/man/man1/unicycler_scrub.1.gz