r-bioc-structuralvariantannotation (1.22.0+ds-2)
Details
Core information at a glance
- Distribution
- ubuntu
- Origin
- ubuntu-resolute
- Repository
- https://nl.archive.ubuntu.com/ubuntu
- Codename
- resolute
- Component
- universe
- Source
- r-bioc-structuralvariantannotation
- Architecture
- amd64v3
- Section
- universe/gnu-r
- Priority
- optional
- Maintainer
- Ubuntu Developers <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 1.3 MB
- Size expected
- 412.3 kB
- Size actual
- 412.3 kB
- Size match
- match
Dependencies
Required package dependencies
Recommends
Recommended package dependencies
- None
Suggested packages
Recommended additional packages
Provides
Virtual packages provided
- None
Description
Variant annotations for structural variants
Tags
Package classification tags
None
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | db5d128f…26babce2 | match |
| SHA-1 | a630cb2b…0a0abc9c | match |
| SHA-256 | edc45e6e…e84d5368 | match |
| SHA-512 | 09c64cd8…002645a0 | match |
Contents
Files and directories included
. usr usr/lib usr/lib/R usr/lib/R/site-library usr/lib/R/site-library/StructuralVariantAnnotation usr/lib/R/site-library/StructuralVariantAnnotation/DESCRIPTION usr/lib/R/site-library/StructuralVariantAnnotation/INDEX usr/lib/R/site-library/StructuralVariantAnnotation/Meta usr/lib/R/site-library/StructuralVariantAnnotation/Meta/Rd.rds usr/lib/R/site-library/StructuralVariantAnnotation/Meta/features.rds usr/lib/R/site-library/StructuralVariantAnnotation/Meta/hsearch.rds usr/lib/R/site-library/StructuralVariantAnnotation/Meta/links.rds usr/lib/R/site-library/StructuralVariantAnnotation/Meta/nsInfo.rds usr/lib/R/site-library/StructuralVariantAnnotation/Meta/package.rds usr/lib/R/site-library/StructuralVariantAnnotation/Meta/vignette.rds usr/lib/R/site-library/StructuralVariantAnnotation/NAMESPACE usr/lib/R/site-library/StructuralVariantAnnotation/NEWS usr/lib/R/site-library/StructuralVariantAnnotation/R usr/lib/R/site-library/StructuralVariantAnnotation/R/StructuralVariantAnnotation usr/lib/R/site-library/StructuralVariantAnnotation/R/StructuralVariantAnnotation.rdb usr/lib/R/site-library/StructuralVariantAnnotation/R/StructuralVariantAnnotation.rdx usr/lib/R/site-library/StructuralVariantAnnotation/doc usr/lib/R/site-library/StructuralVariantAnnotation/doc/index.html usr/lib/R/site-library/StructuralVariantAnnotation/doc/vignettes.R usr/lib/R/site-library/StructuralVariantAnnotation/doc/vignettes.Rmd usr/lib/R/site-library/StructuralVariantAnnotation/extdata usr/lib/R/site-library/StructuralVariantAnnotation/extdata/COLO829.10X.longranger.largeSVs.vcf usr/lib/R/site-library/StructuralVariantAnnotation/extdata/COLO829.nanopore.sniffles.vcf usr/lib/R/site-library/StructuralVariantAnnotation/extdata/COLO829T.purple.sv.ann.vcf.gz usr/lib/R/site-library/StructuralVariantAnnotation/extdata/MT.vcf usr/lib/R/site-library/StructuralVariantAnnotation/extdata/breakdancer-1.4.5.vcf usr/lib/R/site-library/StructuralVariantAnnotation/extdata/breakend.vcf usr/lib/R/site-library/StructuralVariantAnnotation/extdata/colo829_nanoSV_truth_overlap.vcf usr/lib/R/site-library/StructuralVariantAnnotation/extdata/colo829_somatic_gridss.vcf.gz usr/lib/R/site-library/StructuralVariantAnnotation/extdata/colo829_somatic_manta.vcf usr/lib/R/site-library/StructuralVariantAnnotation/extdata/colo829_somatic_novobreak.vcf usr/lib/R/site-library/StructuralVariantAnnotation/extdata/crest.vcf usr/lib/R/site-library/StructuralVariantAnnotation/extdata/delly-0.6.8.vcf usr/lib/R/site-library/StructuralVariantAnnotation/extdata/gridss-missingPartner.vcf usr/lib/R/site-library/StructuralVariantAnnotation/extdata/gridss-na12878.vcf usr/lib/R/site-library/StructuralVariantAnnotation/extdata/gridss.bedpe usr/lib/R/site-library/StructuralVariantAnnotation/extdata/gridss.vcf usr/lib/R/site-library/StructuralVariantAnnotation/extdata/manta-0.29.6.vcf usr/lib/R/site-library/StructuralVariantAnnotation/extdata/manta-1.1.1.vcf usr/lib/R/site-library/StructuralVariantAnnotation/extdata/multipleAltSVs.vcf usr/lib/R/site-library/StructuralVariantAnnotation/extdata/na12878_chr22_Sudmunt2015.vcf usr/lib/R/site-library/StructuralVariantAnnotation/extdata/na12878_chr22_crest.vcf usr/lib/R/site-library/StructuralVariantAnnotation/extdata/na12878_chr22_hydra.vcf usr/lib/R/site-library/StructuralVariantAnnotation/extdata/pindel-0.2.5b6.vcf usr/lib/R/site-library/StructuralVariantAnnotation/extdata/representations.vcf usr/lib/R/site-library/StructuralVariantAnnotation/extdata/simple.vcf usr/lib/R/site-library/StructuralVariantAnnotation/extdata/tigra-0.3.7.vcf usr/lib/R/site-library/StructuralVariantAnnotation/extdata/truthset_somaticSVs_COLO829.vcf usr/lib/R/site-library/StructuralVariantAnnotation/extdata/unnamed.bedpe usr/lib/R/site-library/StructuralVariantAnnotation/extdata/vcf4.2.example.sv.vcf usr/lib/R/site-library/StructuralVariantAnnotation/help usr/lib/R/site-library/StructuralVariantAnnotation/help/AnIndex usr/lib/R/site-library/StructuralVariantAnnotation/help/StructuralVariantAnnotation.rdb usr/lib/R/site-library/StructuralVariantAnnotation/help/StructuralVariantAnnotation.rdx usr/lib/R/site-library/StructuralVariantAnnotation/help/aliases.rds usr/lib/R/site-library/StructuralVariantAnnotation/help/paths.rds usr/lib/R/site-library/StructuralVariantAnnotation/html usr/lib/R/site-library/StructuralVariantAnnotation/html/00Index.html usr/lib/R/site-library/StructuralVariantAnnotation/html/R.css usr/share usr/share/doc usr/share/doc/r-bioc-structuralvariantannotation usr/share/doc/r-bioc-structuralvariantannotation/changelog.Debian.gz usr/share/doc/r-bioc-structuralvariantannotation/copyright