r-bioc-biostrings (2.74.1+dfsg-3)
2 versions available in ubuntu/resolute/universe/arm64
Details
Core information at a glance
- Distribution
- ubuntu
- Origin
- ubuntu-resolute-ports
- Repository
- https://ports.ubuntu.com
- Codename
- resolute
- Component
- universe
- Source
- r-bioc-biostrings
- Architecture
- arm64
- Section
- universe/gnu-r
- Priority
- optional
- Maintainer
- Ubuntu Developers <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 14.6 MB
- Size expected
- 13.3 MB
- Size actual
- 13.3 MB
- Size match
- match
Dependencies
Required package dependencies
- r-api-4.0
- r-api-bioc-3.20
- r-bioc-biocgenerics (>= 0.37.0)
- r-bioc-s4vectors (>= 0.27.12)
- r-bioc-iranges (>= 2.31.2)
- r-bioc-xvector (>= 0.37.1)
- r-bioc-genomeinfodb
- r-cran-crayon
- libc6 (>= 2.38)
Recommends
Recommended package dependencies
- None
Suggested packages
Recommended additional packages
- r-bioc-pwalign
- r-bioc-bsgenome (>= 1.13.14)
- r-bioc-genomicfeatures (>= 1.3.14)
- r-bioc-affy (>= 1.41.3)
- r-cran-runit
- r-bioc-biocstyle
- r-cran-knitr
- r-cran-testthat (>= 3.0.0)
- r-cran-covr
Provides
Virtual packages provided
- None
Description
GNU R string objects representing biological sequences
Tags
Package classification tags
None
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | db648538…5fff5736 | match |
| SHA-1 | 4df7439e…681ac90b | match |
| SHA-256 | fa3137f3…5a6c9eab | match |
| SHA-512 | 249cb8fc…9fda0d96 | match |
Contents
Files and directories included
. usr usr/lib usr/lib/R usr/lib/R/site-library usr/lib/R/site-library/Biostrings usr/lib/R/site-library/Biostrings/DESCRIPTION usr/lib/R/site-library/Biostrings/INDEX usr/lib/R/site-library/Biostrings/Meta usr/lib/R/site-library/Biostrings/Meta/Rd.rds usr/lib/R/site-library/Biostrings/Meta/data.rds usr/lib/R/site-library/Biostrings/Meta/features.rds usr/lib/R/site-library/Biostrings/Meta/hsearch.rds usr/lib/R/site-library/Biostrings/Meta/links.rds usr/lib/R/site-library/Biostrings/Meta/nsInfo.rds usr/lib/R/site-library/Biostrings/Meta/package.rds usr/lib/R/site-library/Biostrings/Meta/vignette.rds usr/lib/R/site-library/Biostrings/NAMESPACE usr/lib/R/site-library/Biostrings/NEWS usr/lib/R/site-library/Biostrings/R usr/lib/R/site-library/Biostrings/R/Biostrings usr/lib/R/site-library/Biostrings/R/Biostrings.rdb usr/lib/R/site-library/Biostrings/R/Biostrings.rdx usr/lib/R/site-library/Biostrings/data usr/lib/R/site-library/Biostrings/data/BLOSUM100.rda usr/lib/R/site-library/Biostrings/data/BLOSUM45.rda usr/lib/R/site-library/Biostrings/data/BLOSUM50.rda usr/lib/R/site-library/Biostrings/data/BLOSUM62.rda usr/lib/R/site-library/Biostrings/data/BLOSUM80.rda usr/lib/R/site-library/Biostrings/data/HNF4alpha.rda usr/lib/R/site-library/Biostrings/data/PAM120.rda usr/lib/R/site-library/Biostrings/data/PAM250.rda usr/lib/R/site-library/Biostrings/data/PAM30.rda usr/lib/R/site-library/Biostrings/data/PAM40.rda usr/lib/R/site-library/Biostrings/data/PAM70.rda usr/lib/R/site-library/Biostrings/data/yeastSEQCHR1.rda usr/lib/R/site-library/Biostrings/doc usr/lib/R/site-library/Biostrings/doc/Biostrings2Classes.R usr/lib/R/site-library/Biostrings/doc/Biostrings2Classes.Rnw usr/lib/R/site-library/Biostrings/doc/Biostrings2Classes.pdf usr/lib/R/site-library/Biostrings/doc/BiostringsQuickOverview.Rnw usr/lib/R/site-library/Biostrings/doc/BiostringsQuickOverview.pdf usr/lib/R/site-library/Biostrings/doc/MultipleAlignments.R usr/lib/R/site-library/Biostrings/doc/MultipleAlignments.Rmd usr/lib/R/site-library/Biostrings/doc/PairwiseAlignments.Rnw usr/lib/R/site-library/Biostrings/doc/PairwiseAlignments.pdf usr/lib/R/site-library/Biostrings/doc/index.html usr/lib/R/site-library/Biostrings/doc/matchprobes.R usr/lib/R/site-library/Biostrings/doc/matchprobes.Rmd usr/lib/R/site-library/Biostrings/extdata usr/lib/R/site-library/Biostrings/extdata/Phylip.txt usr/lib/R/site-library/Biostrings/extdata/README usr/lib/R/site-library/Biostrings/extdata/Sc.fa usr/lib/R/site-library/Biostrings/extdata/Sp.fa usr/lib/R/site-library/Biostrings/extdata/dm3_upstream2000.fa.gz usr/lib/R/site-library/Biostrings/extdata/fastaEx.fa usr/lib/R/site-library/Biostrings/extdata/hg18chr8_gap.txt usr/lib/R/site-library/Biostrings/extdata/hg18chrY_gap.txt usr/lib/R/site-library/Biostrings/extdata/msx2_mRNA.aln usr/lib/R/site-library/Biostrings/extdata/s_1_sequence.txt usr/lib/R/site-library/Biostrings/extdata/someORF.fa usr/lib/R/site-library/Biostrings/extdata/someORF.fa.gz usr/lib/R/site-library/Biostrings/help usr/lib/R/site-library/Biostrings/help/AnIndex usr/lib/R/site-library/Biostrings/help/Biostrings.rdb usr/lib/R/site-library/Biostrings/help/Biostrings.rdx usr/lib/R/site-library/Biostrings/help/aliases.rds usr/lib/R/site-library/Biostrings/help/paths.rds usr/lib/R/site-library/Biostrings/html usr/lib/R/site-library/Biostrings/html/00Index.html usr/lib/R/site-library/Biostrings/html/R.css usr/lib/R/site-library/Biostrings/include usr/lib/R/site-library/Biostrings/include/Biostrings_defines.h usr/lib/R/site-library/Biostrings/include/Biostrings_interface.h usr/lib/R/site-library/Biostrings/include/_Biostrings_stubs.c usr/lib/R/site-library/Biostrings/libs usr/lib/R/site-library/Biostrings/libs/Biostrings.so usr/lib/R/site-library/Biostrings/unitTests usr/lib/R/site-library/Biostrings/unitTests/test_MultipleAlignment.R usr/lib/R/site-library/Biostrings/unitTests/test_XString.R usr/lib/R/site-library/Biostrings/unitTests/test_matchDNAPattern.R.FIXME usr/lib/R/site-library/Biostrings/unitTests/test_seqinfo-methods.R usr/lib/R/site-library/Biostrings/unitTests/test_twoWayAlphabetFrequency.R usr/share usr/share/doc usr/share/doc/r-bioc-biostrings usr/share/doc/r-bioc-biostrings/changelog.Debian.gz usr/share/doc/r-bioc-biostrings/copyright
Versions
2 versions in this repository slot, newest first