igor (1.4.0+dfsg-5build2)

2 versions available in ubuntu/resolute/universe/armhf

Version

Details

Core information at a glance

Distribution: ubuntu
Origin: ubuntu-resolute
Repository: https://nl.archive.ubuntu.com/ubuntu
Codename: resolute
Component: universe
Source: igor
Architecture: armhf
Section: universe/science
Priority: optional
Maintainer: Ubuntu Developers <[email protected]>

Size & integrity

Byte sizes and integrity verification

Installed size: 2.5 MB
Size expected: 586.7 kB
Size actual: 586.7 kB
Size match: match

Dependencies

Required package dependencies

libblas3|libblas.so.3
libc6 (>= 2.38)
libgcc-s1 (>= 3.5)
libgomp1 (>= 6)
libgsl28 (>= 2.8+dfsg)
libjemalloc2 (>= 5.0.0)
libstdc++6 (>= 14)

Recommends

Recommended package dependencies

None

Suggested packages

Recommended additional packages

None

Provides

Virtual packages provided

None

Description

infers V(D)J recombination processes from sequencing data

Homepage Download .deb

Checksums

Hash values and integrity verification status

Type	Expected	Actual	Match
MD5	Not provided	d2056741…a89d125b	not available
SHA-1	Not provided	0de0b9b8…283e2078	not available
SHA-256	Not provided	cc444492…a1279ad1	not available
SHA-512	6bf56fb7…2e0c082d	6bf56fb7…2e0c082d	match

Files and directories included

.
usr
usr/bin
usr/bin/igor
usr/bin/igor-compute_pgen
usr/share
usr/share/doc
usr/share/doc/igor
usr/share/doc/igor/changelog.Debian.gz
usr/share/doc/igor/copyright
usr/share/doc/igor/examples
usr/share/doc/igor/examples/genomicDs.fasta
usr/share/doc/igor/examples/genomicJs_all_curated.fasta
usr/share/doc/igor/examples/genomicVs_with_primers.fasta
usr/share/doc/igor/examples/murugan_naive1_noncoding_demo_seqs.txt
usr/share/igor
usr/share/igor/demo
usr/share/igor/demo/genomicDs.fasta
usr/share/igor/demo/genomicJs_all_curated.fasta
usr/share/igor/demo/genomicVs_with_primers.fasta
usr/share/igor/demo/murugan_naive1_noncoding_demo_seqs.txt
usr/share/igor/models
usr/share/igor/models/heavy_pen_substitution_matrix.csv
usr/share/igor/models/human
usr/share/igor/models/human/IGK
usr/share/igor/models/human/IGK/models
usr/share/igor/models/human/IGK/models/model_marginals.txt
usr/share/igor/models/human/IGK/models/model_parms.txt
usr/share/igor/models/human/IGK/ref_genome
usr/share/igor/models/human/IGK/ref_genome/J_gene_CDR3_anchors.csv
usr/share/igor/models/human/IGK/ref_genome/V_gene_CDR3_anchors.csv
usr/share/igor/models/human/IGK/ref_genome/genomicJs.fasta
usr/share/igor/models/human/IGK/ref_genome/genomicVs.fasta
usr/share/igor/models/human/IGL
usr/share/igor/models/human/IGL/models
usr/share/igor/models/human/IGL/models/model_marginals.txt
usr/share/igor/models/human/IGL/models/model_parms.txt
usr/share/igor/models/human/IGL/ref_genome
usr/share/igor/models/human/IGL/ref_genome/J_gene_CDR3_anchors.csv
usr/share/igor/models/human/IGL/ref_genome/V_gene_CDR3_anchors.csv
usr/share/igor/models/human/IGL/ref_genome/genomicJs.fasta
usr/share/igor/models/human/IGL/ref_genome/genomicVs.fasta
usr/share/igor/models/human/bcr_heavy
usr/share/igor/models/human/bcr_heavy/model.info
usr/share/igor/models/human/bcr_heavy/models
usr/share/igor/models/human/bcr_heavy/models/model_marginals.txt
usr/share/igor/models/human/bcr_heavy/models/model_parms.txt
usr/share/igor/models/human/bcr_heavy/ref_genome
usr/share/igor/models/human/bcr_heavy/ref_genome/J_gene_CDR3_anchors.csv
usr/share/igor/models/human/bcr_heavy/ref_genome/V_gene_CDR3_anchors.csv
usr/share/igor/models/human/bcr_heavy/ref_genome/genomicDs.fasta
usr/share/igor/models/human/bcr_heavy/ref_genome/genomicJs.fasta
usr/share/igor/models/human/bcr_heavy/ref_genome/genomicVs.fasta
usr/share/igor/models/human/bcr_heavy/supplementary_models
usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_3mer_D_hyperm_parms.txt
usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_3mer_J_hyperm_parms.txt
usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_3mer_V_hyperm_parms.txt
usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_5mer_D_hyperm_parms.txt
usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_5mer_J_hyperm_parms.txt
usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_5mer_V_hyperm_parms.txt
usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_7mer_D_hyperm_parms.txt
usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_7mer_J_hyperm_parms.txt
usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_7mer_V_hyperm_parms.txt
usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_9mer_D_hyperm_parms.txt
usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_9mer_J_hyperm_parms.txt
usr/share/igor/models/human/bcr_heavy/supplementary_models/ind_9mer_V_hyperm_parms.txt
usr/share/igor/models/human/bcr_heavy/supplementary_models/models.info
usr/share/igor/models/human/tcr_alpha
usr/share/igor/models/human/tcr_alpha/model.info
usr/share/igor/models/human/tcr_alpha/models
usr/share/igor/models/human/tcr_alpha/models/model_marginals.txt
usr/share/igor/models/human/tcr_alpha/models/model_parms.txt
usr/share/igor/models/human/tcr_alpha/ref_genome
usr/share/igor/models/human/tcr_alpha/ref_genome/J_gene_CDR3_anchors.csv
usr/share/igor/models/human/tcr_alpha/ref_genome/V_gene_CDR3_anchors.csv
usr/share/igor/models/human/tcr_alpha/ref_genome/genomicJs.fasta
usr/share/igor/models/human/tcr_alpha/ref_genome/genomicVs.fasta
usr/share/igor/models/human/tcr_beta
usr/share/igor/models/human/tcr_beta/model.info
usr/share/igor/models/human/tcr_beta/models
usr/share/igor/models/human/tcr_beta/models/model_marginals.txt
usr/share/igor/models/human/tcr_beta/models/model_parms.txt
usr/share/igor/models/human/tcr_beta/ref_genome
usr/share/igor/models/human/tcr_beta/ref_genome/J_gene_CDR3_anchors.csv
usr/share/igor/models/human/tcr_beta/ref_genome/V_gene_CDR3_anchors.csv
usr/share/igor/models/human/tcr_beta/ref_genome/genomicDs.fasta
usr/share/igor/models/human/tcr_beta/ref_genome/genomicJs.fasta
usr/share/igor/models/human/tcr_beta/ref_genome/genomicVs.fasta
usr/share/igor/models/human/tcr_beta/supplementary_models
usr/share/igor/models/human/tcr_beta/supplementary_models/naive_1
usr/share/igor/models/human/tcr_beta/supplementary_models/naive_1/final_marginals.txt
usr/share/igor/models/human/tcr_beta/supplementary_models/naive_1/final_parms.txt
usr/share/igor/models/human/tcr_beta/supplementary_models/naive_1/model.info
usr/share/igor/models/human/tcr_beta/supplementary_models/naive_4
usr/share/igor/models/human/tcr_beta/supplementary_models/naive_4/final_marginals.txt
usr/share/igor/models/human/tcr_beta/supplementary_models/naive_4/final_parms.txt
usr/share/igor/models/human/tcr_beta/supplementary_models/naive_4/model.info
usr/share/igor/models/mouse
usr/share/igor/models/mouse/tcr_beta
usr/share/igor/models/mouse/tcr_beta/model.info
usr/share/igor/models/mouse/tcr_beta/models
usr/share/igor/models/mouse/tcr_beta/models/model_marginals.txt
usr/share/igor/models/mouse/tcr_beta/models/model_parms.txt
usr/share/igor/models/mouse/tcr_beta/ref_genome
usr/share/igor/models/mouse/tcr_beta/ref_genome/J_gene_CDR3_anchors.csv
usr/share/igor/models/mouse/tcr_beta/ref_genome/V_gene_CDR3_anchors.csv
usr/share/igor/models/mouse/tcr_beta/ref_genome/genomicDs.fasta
usr/share/igor/models/mouse/tcr_beta/ref_genome/genomicJs.fasta
usr/share/igor/models/mouse/tcr_beta/ref_genome/genomicVs.fasta
usr/share/man
usr/share/man/man1
usr/share/man/man1/igor.1.gz

Versions

2 versions in this repository slot, newest first