pbhoney (15.8.24+dfsg-8build1)
2 versions available in ubuntu/resolute/universe/armhf
Details
Core information at a glance
- Distribution
- ubuntu
- Origin
- ubuntu-resolute
- Repository
- https://nl.archive.ubuntu.com/ubuntu
- Codename
- resolute
- Component
- universe
- Source
- pbsuite
- Architecture
- armhf
- Section
- universe/science
- Priority
- optional
- Maintainer
- Ubuntu Developers <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 3.9 MB
- Size expected
- 1.1 MB
- Size actual
- 1.1 MB
- Size match
- match
Dependencies
Required package dependencies
- python3:any
- python3-pbsuite-utils (= 15.8.24+dfsg-8build1)
- python3-pbbanana (= 15.8.24+dfsg-8build1)
- python3-pysam
- python3-networkx
- python3-h5py
- python3-numpy
- python3-intervaltree-bio
- blasr
- samtools
Recommends
Recommended package dependencies
Suggested packages
Recommended additional packages
- None
Provides
Virtual packages provided
- None
Description
genomic structural variation discovery
Tags
Package classification tags
None
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | 2b79b683…755723c0 | not available |
| SHA-1 | 9179b0a0…5c1b121f | not available |
| SHA-256 | 97c445ba…87c0a498 | not available |
| SHA-512 | 2f66a62d…a94011e5 | match |
Contents
Files and directories included
. usr usr/bin usr/lib usr/lib/python3 usr/lib/python3/dist-packages usr/lib/python3/dist-packages/pbsuite usr/lib/python3/dist-packages/pbsuite/honey usr/lib/python3/dist-packages/pbsuite/honey/ComplexResolver.py usr/lib/python3/dist-packages/pbsuite/honey/Force.py usr/lib/python3/dist-packages/pbsuite/honey/HSpots.py usr/lib/python3/dist-packages/pbsuite/honey/HSpots.pyx usr/lib/python3/dist-packages/pbsuite/honey/Honey.py usr/lib/python3/dist-packages/pbsuite/honey/SVMachines.py usr/lib/python3/dist-packages/pbsuite/honey/TGraf.py usr/lib/python3/dist-packages/pbsuite/honey/Valid.py usr/lib/python3/dist-packages/pbsuite/honey/__init__.py usr/lib/python3/dist-packages/pbsuite/honey/bakH.py usr/lib/python3/dist-packages/pbsuite/honey/bampie.py usr/lib/python3/dist-packages/pbsuite/honey/massivePhrap.py usr/lib/python3/dist-packages/pbsuite/honey/realign.py usr/lib/python3/dist-packages/pbsuite/honey/recallSpots.py usr/lib/python3/dist-packages/pbsuite/honey/spotH5Merge.py usr/lib/python3/dist-packages/pbsuite/honey/spotH5dump.py usr/lib/python3/dist-packages/pbsuite/honey/spotToBed.py usr/lib/python3/dist-packages/pbsuite/honey/spotToVCF.py usr/lib/python3/dist-packages/pbsuite/honey/svm usr/lib/python3/dist-packages/pbsuite/honey/svm/ecoli_jul1.svm usr/lib/python3/dist-packages/pbsuite/honey/svm/ecoli_jul1.svm/model usr/lib/python3/dist-packages/pbsuite/honey/svm/ecoli_jul1.svm/notes usr/lib/python3/dist-packages/pbsuite/honey/svm/ecoli_jul1.svm/range usr/lib/python3/dist-packages/pbsuite/honey/svm/ecoli_jul1.svm/scale usr/lib/python3/dist-packages/pbsuite/honey/svm/ecoli_jul1.svm/scale.out usr/lib/python3/dist-packages/pbsuite/honey/svm/ecoli_jul1.svm/scale.png usr/lib/python3/dist-packages/pbsuite/honey/svm/ecoli_jul1.svm/train usr/lib/python3/dist-packages/pbsuite/honey/svm/ecoli_jul12.svm usr/lib/python3/dist-packages/pbsuite/honey/svm/ecoli_jul12.svm/metrics usr/lib/python3/dist-packages/pbsuite/honey/svm/ecoli_jul12.svm/model usr/lib/python3/dist-packages/pbsuite/honey/svm/ecoli_jul12.svm/notes usr/lib/python3/dist-packages/pbsuite/honey/svm/ecoli_jul12.svm/range usr/lib/python3/dist-packages/pbsuite/honey/svm/ecoli_jul12.svm/scale usr/lib/python3/dist-packages/pbsuite/honey/svm/ecoli_jul12.svm/scale.out usr/lib/python3/dist-packages/pbsuite/honey/svm/ecoli_jul12.svm/scale.png usr/lib/python3/dist-packages/pbsuite/honey/svm/ecoli_jul12.svm/train usr/share usr/share/doc usr/share/doc/pbhoney usr/share/doc/pbhoney/HoneyReadme.txt.gz usr/share/doc/pbhoney/README.Debian usr/share/doc/pbhoney/README.test usr/share/doc/pbhoney/copyright usr/share/doc/pbhoney/examples usr/share/doc/pbhoney/examples/filtered_subreads.fastq usr/share/doc/pbhoney/examples/lambda_modified.fasta usr/share/doc/pbhoney/examples/lambda_reference.fasta usr/share/doc/pbhoney/examples/modify.py usr/share/doc/pbhoney/examples/workflow.sh usr/share/doc/pbhoney/run-unit-test usr/share/man usr/share/man/man1 usr/share/man/man1/Honey.1.gz usr/bin/Honey usr/bin/Honey.py usr/share/doc/pbhoney/changelog.Debian.gz usr/share/man/man1/Honey.py.1.gz
Versions
2 versions in this repository slot, newest first