rsem (1.3.3+dfsg-3build1)
2 versions available in ubuntu/resolute/universe/riscv64
Details
Core information at a glance
- Distribution
- ubuntu
- Origin
- ubuntu-resolute-ports
- Repository
- https://ports.ubuntu.com
- Codename
- resolute
- Component
- universe
- Source
- rsem
- Architecture
- riscv64
- Section
- universe/science
- Priority
- optional
- Maintainer
- Ubuntu Developers <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 37.6 MB
- Size expected
- 36.1 MB
- Size actual
- 36.1 MB
- Size match
- match
Dependencies
Required package dependencies
- libc6 (>= 2.38)
- libgcc-s1 (>= 3.4)
- libhts3t64 (>= 1.17)
- libstdc++6 (>= 13.1)
- perl:any
- r-base-core
- bowtie|bowtie2
- python3
Recommends
Recommended package dependencies
- None
Suggested packages
Recommended additional packages
Provides
Virtual packages provided
- None
Description
RNA-Seq by Expectation-Maximization
Tags
Package classification tags
None
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | 5437dbbf…9ea465e4 | match |
| SHA-1 | ab2907c7…7010db14 | match |
| SHA-256 | 4d1a7713…699abdc3 | match |
| SHA-512 | 2448b439…374a637e | match |
Contents
Files and directories included
. usr usr/bin usr/bin/convert-sam-for-rsem usr/bin/extract-transcript-to-gene-map-from-trinity usr/bin/rsem-bam2readdepth usr/bin/rsem-bam2wig usr/bin/rsem-build-read-index usr/bin/rsem-calculate-credibility-intervals usr/bin/rsem-calculate-expression usr/bin/rsem-control-fdr usr/bin/rsem-extract-reference-transcripts usr/bin/rsem-gen-transcript-plots usr/bin/rsem-generate-data-matrix usr/bin/rsem-generate-ngvector usr/bin/rsem-get-unique usr/bin/rsem-gff3-to-gtf usr/bin/rsem-parse-alignments usr/bin/rsem-plot-model usr/bin/rsem-plot-transcript-wiggles usr/bin/rsem-prepare-reference usr/bin/rsem-preref usr/bin/rsem-refseq-extract-primary-assembly usr/bin/rsem-run-em usr/bin/rsem-run-gibbs usr/bin/rsem-sam-validator usr/bin/rsem-scan-for-paired-end-reads usr/bin/rsem-simulate-reads usr/bin/rsem-synthesis-reference-transcripts usr/bin/rsem-tbam2gbam usr/bin/rsem_perl_utils.pm usr/share usr/share/doc usr/share/doc/rsem usr/share/doc/rsem/README.md.gz usr/share/doc/rsem/README.test usr/share/doc/rsem/WHAT_IS_NEW.gz usr/share/doc/rsem/changelog.Debian.gz usr/share/doc/rsem/cnt_file_description.txt usr/share/doc/rsem/copyright usr/share/doc/rsem/examples usr/share/doc/rsem/examples/mouse_ref_building_from_transcripts.tar.gz usr/share/doc/rsem/model_file_description.txt.gz usr/share/doc/rsem/run-unit-test usr/share/man usr/share/man/man1 usr/share/man/man1/convert-sam-for-rsem.1.gz usr/share/man/man1/rsem-bam2wig.1.gz usr/share/man/man1/rsem-calculate-expression.1.gz usr/share/man/man1/rsem-control-fdr.1.gz usr/share/man/man1/rsem-generate-ngvector.1.gz usr/share/man/man1/rsem-gff3-to-gtf.1.gz usr/share/man/man1/rsem-plot-transcript-wiggles.1.gz usr/share/man/man1/rsem-prepare-reference.1.gz usr/share/man/man1/rsem-run-ebseq.1.gz usr/share/man/man1/rsem-simulate-reads.1.gz usr/share/perl5 usr/share/perl5/rsem_perl_utils.pm
Versions
2 versions in this repository slot, newest first