q2-demux (2024.5.0+dfsg-1ubuntu3)
2 versions available in ubuntu/resolute/universe/s390x
Details
Core information at a glance
- Distribution
- ubuntu
- Origin
- ubuntu-resolute
- Repository
- https://nl.archive.ubuntu.com/ubuntu
- Codename
- resolute
- Component
- universe
- Source
- q2-demux
- Architecture
- s390x
- Section
- universe/science
- Priority
- optional
- Maintainer
- Ubuntu Developers <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 446.5 kB
- Size expected
- 94.6 kB
- Size actual
- 94.6 kB
- Size match
- match
Dependencies
Required package dependencies
- python3:any
- python3-setuptools
- python3-numpy
- python3-pandas
- python3-skbio
- python3-seaborn
- python3-yaml
- python3-psutil
- python3-ipywidgets
- qiime (>= 2024.5)
- q2-types (>= 2024.5)
- q2templates (>= 2024.5)
- node-d3
Recommends
Recommended package dependencies
- None
Suggested packages
Recommended additional packages
- None
Provides
Virtual packages provided
- None
Description
QIIME 2 plugin for demultiplexing of sequence reads
Tags
Package classification tags
None
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | 6595cca9…504ccf1f | not available |
| SHA-1 | 00661752…98ae0aa8 | not available |
| SHA-256 | 245853d0…d9af228d | not available |
| SHA-512 | 317c4cd0…ddd71529 | match |
Contents
Files and directories included
. usr usr/lib usr/lib/python3 usr/lib/python3/dist-packages usr/lib/python3/dist-packages/q2_demux usr/lib/python3/dist-packages/q2_demux/__init__.py usr/lib/python3/dist-packages/q2_demux/_demux.py usr/lib/python3/dist-packages/q2_demux/_ecc.py usr/lib/python3/dist-packages/q2_demux/_examples.py usr/lib/python3/dist-packages/q2_demux/_filter.py usr/lib/python3/dist-packages/q2_demux/_subsample.py usr/lib/python3/dist-packages/q2_demux/_summarize usr/lib/python3/dist-packages/q2_demux/_summarize/__init__.py usr/lib/python3/dist-packages/q2_demux/_summarize/_visualizer.py usr/lib/python3/dist-packages/q2_demux/_summarize/assets usr/lib/python3/dist-packages/q2_demux/_summarize/assets/dist usr/lib/python3/dist-packages/q2_demux/_summarize/assets/dist/bundle.js usr/lib/python3/dist-packages/q2_demux/_summarize/assets/index.html usr/lib/python3/dist-packages/q2_demux/_summarize/assets/overview.html usr/lib/python3/dist-packages/q2_demux/_summarize/assets/quality-plot.html usr/lib/python3/dist-packages/q2_demux/_tabulate.py usr/lib/python3/dist-packages/q2_demux/_version.py usr/lib/python3/dist-packages/q2_demux/citations.bib usr/lib/python3/dist-packages/q2_demux/plugin_setup.py usr/lib/python3/dist-packages/q2_demux/tests usr/lib/python3/dist-packages/q2_demux/tests/__init__.py usr/lib/python3/dist-packages/q2_demux/tests/data usr/lib/python3/dist-packages/q2_demux/tests/data/bad usr/lib/python3/dist-packages/q2_demux/tests/data/bad/not_real_data.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/data/emp_multiplexed usr/lib/python3/dist-packages/q2_demux/tests/data/emp_multiplexed/barcodes.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/data/emp_multiplexed/sequences.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/data/emp_multiplexed_single_end usr/lib/python3/dist-packages/q2_demux/tests/data/emp_multiplexed_single_end/Undetermined_S0_L001_I1_001.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/data/emp_multiplexed_single_end/Undetermined_S0_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/data/error_correction_details usr/lib/python3/dist-packages/q2_demux/tests/data/error_correction_details/invalid.tsv usr/lib/python3/dist-packages/q2_demux/tests/data/error_correction_details/missing_columns.tsv usr/lib/python3/dist-packages/q2_demux/tests/data/error_correction_details/positive.tsv usr/lib/python3/dist-packages/q2_demux/tests/data/filter_samples_paired_end usr/lib/python3/dist-packages/q2_demux/tests/data/filter_samples_paired_end/dir_fmt usr/lib/python3/dist-packages/q2_demux/tests/data/filter_samples_paired_end/dir_fmt/MANIFEST usr/lib/python3/dist-packages/q2_demux/tests/data/filter_samples_paired_end/dir_fmt/metadata.yml usr/lib/python3/dist-packages/q2_demux/tests/data/filter_samples_paired_end/dir_fmt/sample1_1_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/data/filter_samples_paired_end/dir_fmt/sample1_1_L001_R2_001.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/data/filter_samples_paired_end/dir_fmt/sample2_2_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/data/filter_samples_paired_end/dir_fmt/sample2_2_L001_R2_001.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/data/filter_samples_paired_end/filter_all.tsv usr/lib/python3/dist-packages/q2_demux/tests/data/filter_samples_paired_end/filter_none.tsv usr/lib/python3/dist-packages/q2_demux/tests/data/filter_samples_paired_end/filter_subset.tsv usr/lib/python3/dist-packages/q2_demux/tests/data/filter_samples_single_end usr/lib/python3/dist-packages/q2_demux/tests/data/filter_samples_single_end/dir_fmt usr/lib/python3/dist-packages/q2_demux/tests/data/filter_samples_single_end/dir_fmt/MANIFEST usr/lib/python3/dist-packages/q2_demux/tests/data/filter_samples_single_end/dir_fmt/metadata.yml usr/lib/python3/dist-packages/q2_demux/tests/data/filter_samples_single_end/dir_fmt/sample1_1_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/data/filter_samples_single_end/dir_fmt/sample2_2_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/data/filter_samples_single_end/filter_all.tsv usr/lib/python3/dist-packages/q2_demux/tests/data/filter_samples_single_end/filter_none.tsv usr/lib/python3/dist-packages/q2_demux/tests/data/filter_samples_single_end/filter_subset.tsv usr/lib/python3/dist-packages/q2_demux/tests/data/reverse_only usr/lib/python3/dist-packages/q2_demux/tests/data/reverse_only/MANIFEST usr/lib/python3/dist-packages/q2_demux/tests/data/reverse_only/metadata.yml usr/lib/python3/dist-packages/q2_demux/tests/data/reverse_only/sample2_2_L001_R2_001.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/data/subsample_paired_end usr/lib/python3/dist-packages/q2_demux/tests/data/subsample_paired_end/sample1_1_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/data/subsample_paired_end/sample1_1_L001_R2_001.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/data/subsample_paired_end/sample2_2_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/data/subsample_paired_end/sample2_2_L001_R2_001.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/data/subsample_paired_end/sample3_3_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/data/subsample_paired_end/sample3_3_L001_R2_001.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/data/subsample_paired_end/sample4_4_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/data/subsample_paired_end/sample4_4_L001_R2_001.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/data/subsample_paired_end/sample5_5_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/data/subsample_paired_end/sample5_5_L001_R2_001.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/data/subsample_single_end usr/lib/python3/dist-packages/q2_demux/tests/data/subsample_single_end/sample1_1_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/data/subsample_single_end/sample2_2_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/data/subsample_single_end/sample3_3_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/data/subsample_single_end/sample4_4_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/data/subsample_single_end/sample5_5_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/data/summarize_empty usr/lib/python3/dist-packages/q2_demux/tests/data/summarize_empty/empty_forward_in_paired usr/lib/python3/dist-packages/q2_demux/tests/data/summarize_empty/empty_forward_in_paired/EMPTY_FORWARD_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/data/summarize_empty/empty_forward_in_paired/EMPTY_FORWARD_L001_R2_001.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/data/summarize_empty/empty_forward_in_paired/MANIFEST usr/lib/python3/dist-packages/q2_demux/tests/data/summarize_empty/empty_forward_in_paired/metadata.yml usr/lib/python3/dist-packages/q2_demux/tests/data/summarize_empty/empty_paired_end usr/lib/python3/dist-packages/q2_demux/tests/data/summarize_empty/empty_paired_end/EMPTY_FILE_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/data/summarize_empty/empty_paired_end/EMPTY_FILE_L001_R2_001.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/data/summarize_empty/empty_paired_end/MANIFEST usr/lib/python3/dist-packages/q2_demux/tests/data/summarize_empty/empty_paired_end/metadata.yml usr/lib/python3/dist-packages/q2_demux/tests/data/summarize_empty/empty_reverse_in_paired usr/lib/python3/dist-packages/q2_demux/tests/data/summarize_empty/empty_reverse_in_paired/EMPTY_REVERSE_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/data/summarize_empty/empty_reverse_in_paired/EMPTY_REVERSE_L001_R2_001.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/data/summarize_empty/empty_reverse_in_paired/MANIFEST usr/lib/python3/dist-packages/q2_demux/tests/data/summarize_empty/empty_reverse_in_paired/metadata.yml usr/lib/python3/dist-packages/q2_demux/tests/data/summarize_empty/empty_single_end usr/lib/python3/dist-packages/q2_demux/tests/data/summarize_empty/empty_single_end/EMPTY_SINGLE_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/data/summarize_empty/empty_single_end/MANIFEST usr/lib/python3/dist-packages/q2_demux/tests/data/summarize_empty/empty_single_end/metadata.yml usr/lib/python3/dist-packages/q2_demux/tests/data/tabulate_read_counts_paired_end_1 usr/lib/python3/dist-packages/q2_demux/tests/data/tabulate_read_counts_paired_end_1/sample1_1_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/data/tabulate_read_counts_paired_end_1/sample1_1_L001_R2_001.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/data/tabulate_read_counts_single_end_1 usr/lib/python3/dist-packages/q2_demux/tests/data/tabulate_read_counts_single_end_1/sample1_1_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/data/tabulate_read_counts_single_end_1/sample2_2_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/data/tabulate_read_counts_single_end_1/sample3_3_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/data/tabulate_read_counts_single_end_1/sample4_4_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/data/tabulate_read_counts_single_end_1/sample5_5_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/data/tabulate_read_counts_single_end_2 usr/lib/python3/dist-packages/q2_demux/tests/data/tabulate_read_counts_single_end_2/sample6_1_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/data/tabulate_read_counts_single_end_2/sample7_2_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_demux/tests/test_demux.py usr/lib/python3/dist-packages/q2_demux/tests/test_ecc.py usr/lib/python3/dist-packages/q2_demux/tests/test_filter.py usr/lib/python3/dist-packages/q2_demux/tests/test_subsample.py usr/lib/python3/dist-packages/q2_demux/tests/test_tabulate.py usr/lib/python3/dist-packages/q2_demux-2024.5.0.egg-info usr/lib/python3/dist-packages/q2_demux-2024.5.0.egg-info/PKG-INFO usr/lib/python3/dist-packages/q2_demux-2024.5.0.egg-info/dependency_links.txt usr/lib/python3/dist-packages/q2_demux-2024.5.0.egg-info/entry_points.txt usr/lib/python3/dist-packages/q2_demux-2024.5.0.egg-info/not-zip-safe usr/lib/python3/dist-packages/q2_demux-2024.5.0.egg-info/top_level.txt usr/share usr/share/doc usr/share/doc/q2-demux usr/share/doc/q2-demux/changelog.Debian.gz usr/share/doc/q2-demux/copyright usr/share/lintian usr/share/lintian/overrides usr/share/lintian/overrides/q2-demux
Versions
2 versions in this repository slot, newest first